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cff-version: 1.2.0
message: "If you use flexyBayes in your research, please cite it as below."
title: "flexyBayes: Flexible Bayesian Mixed Models with ASReml and brms-Style Syntax"
abstract: >-
  Specify mixed models using familiar ASReml or brms-style formula syntax
  and estimate them via INLA or brms (Stan). Returns results in formats
  compatible with the standard R modelling ecosystem, and compares the
  same model across engines with triangulate(), a diagnostic on a gated
  overlap rather than a validation contract. Supports a selected set of
  structured covariance models -- diagonal and unstructured
  genotype-by-environment variances, per-level residual variances,
  known-covariance genomic and pedigree models, separable AR1 spatial
  fields on INLA, and univariate P-splines. Structures outside this set,
  including factor-analytic terms and the ASReml residual autoregressive
  formulation, raise typed refusals naming the nearest implemented
  alternative.
type: software
authors:
  - given-names: "Max"
    family-names: "Moldovan"
    email: "max.moldovan@adelaide.edu.au"
    orcid: "https://orcid.org/0000-0001-9680-8474"
  - given-names: "Emi"
    family-names: "Tanaka"
    orcid: "https://orcid.org/0000-0002-1455-259X"
  - given-names: "Francis K.C."
    family-names: "Hui"
    orcid: "https://orcid.org/0000-0003-0765-3533"
  - given-names: "Anabel"
    family-names: "Forte Deltell"
    orcid: "https://orcid.org/0000-0001-9534-1817"
version: 0.10.0
date-released: "2026-08-28"
license: MIT
repository-code: "https://github.com/AAGI-AUS/flexyBayes"
url: "https://github.com/AAGI-AUS/flexyBayes"
keywords:
  - bayesian-statistics
  - mixed-models
  - mcmc
  - inla
  - asreml
  - r
references:
  - type: article
    authors:
      - family-names: "Simpson"
        given-names: "Daniel"
      - family-names: "Rue"
        given-names: "Håvard"
      - family-names: "Riebler"
        given-names: "Andrea"
      - family-names: "Martins"
        given-names: "Thiago G."
      - family-names: "Sørbye"
        given-names: "Sigrunn H."
    title: "Penalising Model Component Complexity: A Principled, Practical Approach to Constructing Priors"
    journal: "Statistical Science"
    year: 2017
    volume: 32
    issue: 1
    start: 1
    end: 28
    doi: "10.1214/16-STS576"
  - type: article
    authors:
      - family-names: "Rue"
        given-names: "Håvard"
      - family-names: "Martino"
        given-names: "Sara"
      - family-names: "Chopin"
        given-names: "Nicolas"
    title: "Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations"
    journal: "Journal of the Royal Statistical Society: Series B"
    year: 2009
    volume: 71
    issue: 2
    start: 319
    end: 392
    doi: "10.1111/j.1467-9868.2008.00700.x"