Final preparations for cchsflow v3 - #191

Merged

rafdoodle merged 196 commits into

devfrom

Jul 16, 2026

Commits on Jun 4, 2020

[Feature] add papers branch to repo
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[Feature] edit abstract to fit 250 word limit
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[Feature] edits to meet 3000 word limit
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[feature] suggested edits to abstract and intro
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[Feature] finalize structured abstract, move documents to CJPH folder
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add missing contributor to abstract
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[feature] add study size to CCHS in abstract.
DougManuel
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Commits on Jul 23, 2020

[Feature] update titlepage
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[Feature] edits to paper
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[Feature] minor edits to rmd
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Commits on Aug 17, 2020

[edits] public health practice paper - abstract and intro
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[edits] public health practice paper - intro and background
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[edits] public health practice paper - methods
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Commits on Aug 19, 2020

[edits] public health practice paper - results
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Commits on Aug 20, 2020

[Feature] add figures, feedback from external reviewers
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[edits] public health practice paper - discussion
DougManuel
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Merge remote-tracking branch 'origin/paper-writeups' into paper-writeups
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[feature] resolve merge conflicts
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[bug] fix yml header
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[feature] change cchsflow document image
DougManuel
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Commits on Aug 21, 2020

[edits] public health practice paper - add roadmap to discussion
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[Refactor] change citation style, fix broken latex citations
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[Refactor] Minor edits to center graph and remove some white space
rvyuha
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[Feature] add additional nodes
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[Bug] Modified end of lines
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[Feature] edits to text, addition of sources
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[edits] small edits throughout. References added
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Merge remote-tracking branch 'origin/paper-writeups' into paper-writeups
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[Feature] add translated abstract
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Commits on Aug 23, 2020

[edits] pulbic health practice paper
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[Feature] edits to paper, edits to .bib file
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Commits on Aug 24, 2020

[Feature] final edits
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[feature] add French abstract and edits to public health practice paper
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Commits on Aug 26, 2020

[Feature] final edits before submission
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Commits on Sep 2, 2020

[Feature] edits to paper following CJPH feedback
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Commits on Nov 6, 2020

Commits on Nov 9, 2020

[Feature] edits to text - rmv contractions & 1st person terms
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[Feature] edits to paper
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[feature] edits to reduce CJPH word length
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Merge remote-tracking branch 'origin/paper-writeups' into paper-writeups
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[feature] Edits to the CJPH paper
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[feature] add CJPH template to papers
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[feature] add MS Word template
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[Feature] minor edits to cjph paper
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Commits on Dec 14, 2020

[Feature] prepare for cjph resubmission
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Commits on Dec 16, 2020

[Bug] upload correct titlepage
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Commits on Dec 17, 2020

[Feature] add author contributions
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Commits on Dec 18, 2020

[Refactor] move author contributions to titlepage
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Commits on Sep 1, 2022

Merge branch 'master' into paper-writeups
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Create folder for uRos presentation
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Update bibliography.bib
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Commits on Sep 6, 2022

Reword abstract
kittychenn
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Commits on Sep 8, 2022

Edit abstract
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uROS suggested edits
DougManuel
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Commits on Sep 14, 2022

Edits to text
CBjerke
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Merge pull request #120 from Big-Life-Lab/uros-presentation
DougManuel
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Add citation for recodeflow
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Commits on Sep 15, 2022

Add authorship list
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Merge branch 'uros-presentation' into paper-writeups
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e4141b9

Commits on Sep 24, 2025

ignore .Rcheck folder
yulric
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updated DESCRIPTION file with suggested packages
yulric
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added url field to pkgdown config
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added newline to pkgdown config
yulric
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updates to getting started guide
yulric
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documentation logo fixes
yulric
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Commits on Jan 15, 2026

Added new variable PACFLEI, leisure physical activity
yulric
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f47baff
Updated PACDEE variable for the master file
yulric
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Updated PAA_045 for the master file
yulric
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Updated PAA_050 variable for the master file
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Updated PAA_075 variable for the master file
yulric
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Updated PAA_080 variable for the master file
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Updated PAADVDYS variable for the master file
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Updated PAADVVIG variable for the master file
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Updated PAYDVTOA for the master file
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Updated PAYDVADL for the master file
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Updated PAYDVVIG variable for the master file
yulric
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Updated the PAYDVDYS variable for the master file
yulric
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Updated the energy_exp variable for the master sheet
yulric
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c74e14e

Commits on Jan 16, 2026

Added new variable for the master file, DEN_132 last time visited dental professional
yulric
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8a46409

Commits on Jan 19, 2026

PA harmonization: fixes, 2019-2020 extension, and PAADVWHO
DougManuel
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7db9971

Commits on Jan 27, 2026

Add CEP-006 oral health review with PUMF integration testing
DougManuel
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Fix CSV formatting for GitHub Actions
DougManuel
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Commits on Feb 4, 2026

Commits on Feb 5, 2026

Merge pull request #158 from Big-Life-Lab/v3-den-132
rafdoodle
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a5f902e
Brought in Caitlin's commits from PR #149
rafdoodle
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c46592a

Commits on Feb 6, 2026

Commits on Feb 12, 2026

Commits on Feb 13, 2026

Commits on Feb 14, 2026

Minor edits to few physical activity variables
rafdoodle
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4548eee

Commits on Feb 25, 2026

Bringing in changes from PR #170; eliminated _m fron DHHGAGE_cont
rafdoodle
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Merge pull request #174 from Big-Life-Lab/v3-demographics
rafdoodle
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613d326
Bringing in changes from PR #169
rafdoodle
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54199b2

Commits on Feb 26, 2026

Bringing in changes from PR #168
rafdoodle
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3907d62

Commits on Mar 11, 2026

Extended energy_exp to 2019-2020 and made its function usable for Master data
rafdoodle
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Commits on Mar 27, 2026

Bringing in csv changes and refactored alcohol function architecture from PR #166
rafdoodle
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650586a
Bringing in cep from PR #166
rafdoodle
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Commits on Mar 28, 2026

Commits on Apr 1, 2026

Renamed ADL_0X_A to ADL_0X_cat4
rafdoodle
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Renamed DHHGAGE_X variants and DHH_MS_A
rafdoodle
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01462d0

Commits on Apr 2, 2026

Bringing in csv changes and refactored BMI functions from PR #146
rafdoodle
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Commits on Apr 3, 2026

Bringing in changes from PR #167
rafdoodle
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Commits on Apr 7, 2026

Bringing in changes from PR #176
rafdoodle
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Commits on Apr 8, 2026

Commits on Apr 11, 2026

Commits on Apr 15, 2026

Extended select DHHGAGE variants to 2019-2020 and 2022 PUMF data; renamed DHHGAGE_2005plus to DHHGAGE_2005to2018
rafdoodle
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eda1756

Commits on Apr 29, 2026

feat(smoking): CEP-002 smoking variable harmonisation + v3 DV infrastructure
rafdoodle
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Commits on Apr 30, 2026

Ensured age and sex variables present in all 2001-2023 PUMF and Master cycles; rebuilt RData from csv worksheets
rafdoodle
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Commits on May 6, 2026

Bringing in all relevant files for Yulric from PR #181
rafdoodle
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Commits on Jun 3, 2026

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Commits on Jun 24, 2026

Addressed #178 and #179 by extending SDC ethnicity/language/migration variables to 2019-2023 Master
rafdoodle
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52d5c0b

Commits on Jun 25, 2026

Incorporated 3-step architecture and addressed #173 for all DemPoRTv2-used derived variable functions in v3 branch; regenerated NAMESPACE as well after properly naming such functions
rafdoodle
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f078e9d

Commits on Jun 26, 2026

Commits on Jun 27, 2026

Added prep_cat_output() helper, which preserves tagged NA distinctions (a/b/c) through recodeflow's factor conversion for categorical derived variable functions; applied to all 18 categorical deriv…
rafdoodle
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Commits on Jun 29, 2026

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Commits on Jul 7, 2026

Added missing 2023 Master coverage for certain HUI hearing and vision variables
rafdoodle
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Commits on Jul 8, 2026

Extended several chronic condition (CCC) variables to 2023 Master cycle
rafdoodle
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Extended CCCG102_2005plus to 2019-2020 PUMF cycle
rafdoodle
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Renamed ALCDTTM_A to ALCDTTM_former
rafdoodle
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Commits on Jul 9, 2026

Commits on Jul 15, 2026