Skip to content

Hi there 👋 we are the Biodata Analysis Group

The Biodata Analysis Group (also known as the Bioinformatics Lab) at the Institute of Applied Biosciences (INAB / CERTH) is active in Bioinformatics research, focusing on the design of new algorithms and pipelines.

We are a group of enthusiastic researchers, active in the following key fields:

  • Machine Learning and Data Mining
  • Multi-omics data integration
  • Training for Life Sciences

For more details, have a look at our site.

Popular repositories Loading

  1. UMIc UMIc Public

    Forked from mcmaniou/Project-UMIs

    A framework implementing a method for UMI deduplication and reads correction.

    R 9 3

  2. synth4bench synth4bench Public

    Forked from sfragkoul/synth4bench

    A pipeline for generating synthetic genomics data for the evaluation of tumor-only somatic variant calling algorithms.

    R 7 1

  3. CWL_HTS_pipelines CWL_HTS_pipelines Public

    CWL workflows and wrappers for processing HTS data from RNA-Seq, ChIP-Seq and Germline Variant calling experiments

    Common Workflow Language 6 3

  4. ELIXIR-BFSP-Odyssey ELIXIR-BFSP-Odyssey Public

    Exploring Molecular Biodiversity: An Interactive R Shiny App Approach

    R 4 9

  5. tripr tripr Public

    T-cell Receptor/Immunoglobulin Profiler {tripr}

    R 3 5

  6. virtual-tutorial-perturbation-modelling virtual-tutorial-perturbation-modelling Public

    Jupyter Notebook 3 3

Repositories

Showing 10 of 72 repositories
  • DOME-Training-Course Public

    This a repository that holds the training course for the DOME ML Recommendations.

    BiodataAnalysisGroup/DOME-Training-Course's past year of commit activity
    TeX 0 0 0 0 Updated Sep 13, 2026
  • ELIXIR-BFSP-Odyssey-Lesson Public template Forked from elixir-europe-training/ELIXIR-TrP-LessonTemplate-MkDocs

    ELIXIR BFSP Odyssey Lesson

    BiodataAnalysisGroup/ELIXIR-BFSP-Odyssey-Lesson's past year of commit activity
    TeX 0 8 0 0 Updated Sep 13, 2026
  • BiodataAnalysisGroup.github.io Public

    Biodata Analysis Group website

    BiodataAnalysisGroup/BiodataAnalysisGroup.github.io's past year of commit activity
    HTML 1 MIT 2 0 0 Updated Sep 7, 2026
  • tripr Public

    T-cell Receptor/Immunoglobulin Profiler {tripr}

    BiodataAnalysisGroup/tripr's past year of commit activity
    R 3 MIT 5 1 1 Updated Aug 24, 2026
  • lineagespot Public Forked from npechl/lineagespot

    Ιdentify and assign different SARS-CoV-2 lineages based on a single VCF file

    BiodataAnalysisGroup/lineagespot's past year of commit activity
    R 2 2 0 0 Updated Aug 20, 2026
  • teiresias2 Public Forked from natanast/teiresias2
    BiodataAnalysisGroup/teiresias2's past year of commit activity
    Python 0 3 0 0 Updated Aug 6, 2026
  • BiodataAnalysisGroup/ahead-resources's past year of commit activity
    R 0 3 0 0 Updated Aug 4, 2026
  • synth4bench Public Forked from sfragkoul/synth4bench

    A pipeline for generating synthetic genomics data for the evaluation of tumor-only somatic variant calling algorithms.

    BiodataAnalysisGroup/synth4bench's past year of commit activity
    R 7 MIT 2 0 0 Updated Jul 20, 2026
  • IgIDivA_2.0 Public

    IgIDivA 2.0 (Immunoglobulin Intraclonal Diversification Analysis) is a purpose-built tool for the analysis of the intraclonal diversification process using high-throughput sequencing data. It is written in shiny R.

    BiodataAnalysisGroup/IgIDivA_2.0's past year of commit activity
    R 0 MIT 0 0 0 Updated Jul 6, 2026
  • protein-metrics Public Forked from Sofokli5/protein-metrics

    What do proteins have to tell us about themselves?

    BiodataAnalysisGroup/protein-metrics's past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Jul 6, 2026

Most used topics

Loading…