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tests(unit): mock moment of inertia in UA axes error test
1 parent 42587de commit 3aed947

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Lines changed: 1 addition & 5 deletions

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‎tests/unit/CodeEntropy/levels/test_axes.py‎

Lines changed: 1 addition & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -129,7 +129,6 @@ def test_get_residue_axes_one_residue_uses_principal_axes(monkeypatch):
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u = MagicMock()
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u.dimensions = np.array([10.0, 10.0, 10.0, 90, 90, 90])
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u.atoms.principal_axes.return_value = np.eye(3)
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# atom_set non-empty => bonded branch
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def _select_atoms(q):
@@ -159,7 +158,6 @@ def test_get_UA_axes_uses_principal_axes_when_single_heavy(monkeypatch):
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ax = AxesCalculator()
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u = MagicMock()
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u.dimensions = np.array([10.0, 10.0, 10.0, 90, 90, 90])
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u.atoms.principal_axes.return_value = np.eye(3)
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u.center_of_mass.return_value = np.array([[4.0, 0.0, 0.0]])
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# heavy_atoms length <= 1 => principal_axes path
@@ -666,13 +664,11 @@ def test_get_residue_axes_one_residue_principal_axes_path(monkeypatch):
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residue = MagicMock()
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residue.__len__.return_value = 1
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residue.atoms.principal_axes.return_value = np.eye(3) * 2
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residue.atoms.center_of_mass.return_value = np.array([1.0, 2.0, 3.0])
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residue.center_of_mass.return_value = np.array([1.0, 2.0, 3.0])
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u = MagicMock()
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u.dimensions = np.array([10.0, 10.0, 10.0, 90, 90, 90])
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u.atoms.principal_axes.return_value = np.eye(3) * 2
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def _select_atoms(q):
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if q.startswith("(resindex"):
@@ -1788,7 +1784,7 @@ def _select_atoms(q):
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def test_get_UA_axes_raises_when_only_rot_axes_fail(monkeypatch):
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ax = AxesCalculator()
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u = MagicMock()
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u.atoms.principal_axes.return_value = np.eye(3)
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u.atoms.atoms.moment_of_inertia.return_value = np.diag([3.0, 2.0, 1.0])
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u.dimensions = np.array([10.0, 10.0, 10.0, 90, 90, 90])
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heavy_atoms = [
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_atom(index=0, mass=12.0, pos=(1, 0, 0)),

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