Issues

• ImportError: cannot import name 'Texture3D' from 'vispy.visuals.volume'

  ChristophKirst/ClearMap#45 · Filter by author camtboyd opened on May 26, 2022
  2

• Elastix runtime error

  ChristophKirst/ClearMap#44 · Filter by author Hesham3esa opened on Nov 26, 2021

• Issue with Installation, setting.py specifically

  ChristophKirst/ClearMap#41 · Filter by author Artem-ctrl opened on Feb 25, 2021
  3

• findCenterOfMaxima returns non integer center coordinates, which are not valid in voxelizePixel function

  ChristophKirst/ClearMap#40 · Filter by author pderdeyn opened on Jul 10, 2020

• Problems with Elastix

  ChristophKirst/ClearMap#38 · Filter by author enovinbakht opened on Oct 7, 2019
  2

• Two of the Unlabelled regions actually labels parts of two different regions

  ChristophKirst/ClearMap#37 · Filter by author coelhocao opened on Sep 30, 2019

• itk::ERROR: RandomCoordinateSampler Please select a smaller SampleRegionSize!

  ChristophKirst/ClearMap#35 · Filter by author pforai opened on Sep 24, 2019

• Too many files open

  ChristophKirst/ClearMap#34 · Filter by author Sattlert2 opened on Aug 23, 2019

• 'OverflowError('cannot serialize a string larger than 2 GiB',)

  ChristophKirst/ClearMap#32 · Filter by author mkywall opened on Aug 8, 2019

• TIFFReadDirectory warning: Unknown field with tag 50838

  ChristophKirst/ClearMap#31 · Filter by author mbzkandel opened on Aug 2, 2019
  1

• Region specific heatmaps

  ChristophKirst/ClearMap#28 · Filter by author keithmurphy opened on Jun 11, 2019
  2

• Anyone tried using the ABA Mouse CCF v3 as Atlas and Annotation files?

  ChristophKirst/ClearMap#26 · Filter by author auesro opened on Feb 22, 2019
  7

• raise RuntimeError('alignData:

  ChristophKirst/ClearMap#25 · Filter by author keithmurphy opened on Feb 16, 2019
  22

• IndexError when callling plt.plotOverlayPoints(data, cells, z = (10,16))

  ChristophKirst/ClearMap#22 · Filter by author vzickus opened on Jan 25, 2019
  2

• 'module' object has no attribute 'FileList' when calling "stat.calculateStatistics"

  ChristophKirst/ClearMap#21 · Filter by author vzickus opened on Jan 25, 2019

• test annotation data download

  ChristophKirst/ClearMap#20 · Filter by author crazyhottommy opened on Jan 24, 2019
  15

• TypeError: writeData() got an unexpected keyword argument 'startIndex' when setting "save" option in Cell Detection Parameters

  ChristophKirst/ClearMap#19 · Filter by author vzickus opened on Dec 12, 2018
  2

• can't run clearmap

  ChristophKirst/ClearMap#17 · Filter by author AbsolemPillar opened on Sep 26, 2018
  6

• ImportError when importing ClearMap.Analysis.VoxelizationCode (Cython 0.25)

  ChristophKirst/ClearMap#11 · Filter by author djarecka opened on Feb 19, 2017