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add GA id
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‎css/styles.css‎

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@@ -745,6 +745,8 @@ nav.scrolled { box-shadow: 0 2px 20px rgba(0,0,0,.35); }
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.tool-badge.pkg { background: #EFF6FF; color: #1E40AF; }
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.tool-badge.dev { background: #F1F5F9; color: #475569; }
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.tool-badges { display: flex; flex-wrap: wrap; gap: .4rem; }
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.tool-links { display: flex; flex-direction: column; gap: .5rem; margin-top: .25rem; }
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.tool-link-row { display: flex; flex-wrap: wrap; gap: .45rem; }
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‎index.html‎

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<!-- Google tag (gtag.js) -->
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<script async src="https://www.googletagmanager.com/gtag/js?id=G-6FLD1GNCMB"></script>
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<script>
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window.dataLayer = window.dataLayer || [];
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function gtag(){dataLayer.push(arguments);}
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gtag('js', new Date());
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gtag('config', 'G-6FLD1GNCMB');
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</script>
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<meta charset="UTF-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
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<meta name="description"

‎join.html‎

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<!-- Google tag (gtag.js) -->
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<script async src="https://www.googletagmanager.com/gtag/js?id=G-6FLD1GNCMB"></script>
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<script>
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window.dataLayer = window.dataLayer || [];
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function gtag(){dataLayer.push(arguments);}
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gtag('js', new Date());
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gtag('config', 'G-6FLD1GNCMB');
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</script>
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<meta charset="UTF-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
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<meta name="description"

‎js/main.js‎

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@@ -228,7 +228,8 @@ function initSoftwareFilter() {
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// Show/hide individual tool cards
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document.querySelectorAll('#software-all-grid .tool-card').forEach(card => {
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if (filter === 'all' || card.dataset.toolType === filter) {
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const types = (card.dataset.toolType || '').split(/\s+/);
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if (filter === 'all' || types.includes(filter)) {
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card.style.display = '';
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} else {
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card.style.display = 'none';

‎news.html‎

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<!-- Google tag (gtag.js) -->
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<script async src="https://www.googletagmanager.com/gtag/js?id=G-6FLD1GNCMB"></script>
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<script>
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window.dataLayer = window.dataLayer || [];
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function gtag(){dataLayer.push(arguments);}
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gtag('js', new Date());
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gtag('config', 'G-6FLD1GNCMB');
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</script>
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<meta charset="UTF-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
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<meta name="description"

‎publications.html‎

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<!-- Google tag (gtag.js) -->
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<script async src="https://www.googletagmanager.com/gtag/js?id=G-6FLD1GNCMB"></script>
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<script>
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window.dataLayer = window.dataLayer || [];
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function gtag(){dataLayer.push(arguments);}
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gtag('js', new Date());
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gtag('config', 'G-6FLD1GNCMB');
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</script>
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<meta charset="UTF-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
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<meta name="description"

‎sections/nuno.html‎

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<!-- Google tag (gtag.js) -->
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<script async src="https://www.googletagmanager.com/gtag/js?id=G-6FLD1GNCMB"></script>
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<script>
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window.dataLayer = window.dataLayer || [];
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function gtag(){dataLayer.push(arguments);}
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gtag('js', new Date());
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gtag('config', 'G-6FLD1GNCMB');
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</script>
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<meta charset="UTF-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
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<meta name="description"

‎sections/software.html‎

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@@ -67,15 +67,25 @@ <h2 class="section-title fade-up">Bioinformatics tools</h2>
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</div>
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<!-- betAS -->
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<div class="tool-card fade-up" style="transition-delay:.05s;" data-tool-type="webapp">
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<span class="tool-badge webapp">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<circle cx="12" cy="12" r="10"/>
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<path d="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z"/>
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</svg>
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Online Web App
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</span>
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<div class="tool-card fade-up" style="transition-delay:.05s;" data-tool-type="webapp pkg">
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<div class="tool-badges">
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<span class="tool-badge webapp">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<circle cx="12" cy="12" r="10"/>
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<path d="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z"/>
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</svg>
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Online Web App
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</span>
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<span class="tool-badge pkg">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<path d="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z"/>
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<path d="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12"/>
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</svg>
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R Package (GitHub)
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</span>
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</div>
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<div class="tool-name">betAS</div>
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<p class="tool-desc">
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Intuitive differential alternative splicing analyses using beta
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</div>
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<!-- psichomics -->
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<div class="tool-card fade-up" style="transition-delay:.15s;" data-tool-type="webapp">
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<span class="tool-badge webapp">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<circle cx="12" cy="12" r="10"/>
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<path d="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z"/>
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</svg>
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Online Web App
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</span>
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<div class="tool-card fade-up" style="transition-delay:.15s;" data-tool-type="webapp pkg">
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<div class="tool-badges">
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<span class="tool-badge webapp">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<circle cx="12" cy="12" r="10"/>
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<path d="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z"/>
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</svg>
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Online Web App
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</span>
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<span class="tool-badge pkg">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<path d="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z"/>
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<path d="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12"/>
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</svg>
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R/Bioconductor
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</span>
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</div>
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<div class="tool-name">psichomics</div>
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<p class="tool-desc">
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Alternative splicing quantification, visualisation, and analysis from
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</div>
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<!-- markeR -->
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<div class="tool-card software-only fade-up" style="transition-delay:.3s;" data-tool-type="pkg">
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<span class="tool-badge pkg">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<path d="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z"/>
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<path d="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12"/>
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</svg>
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Bioconductor Package
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</span>
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<div class="tool-card fade-up" style="transition-delay:.3s;" data-tool-type="webapp pkg">
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<div class="tool-badges">
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<span class="tool-badge webapp">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<circle cx="12" cy="12" r="10"/>
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<path d="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z"/>
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</svg>
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Online Web App
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</span>
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<span class="tool-badge pkg">
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<svg width="11" height="11" viewBox="0 0 24 24" fill="none"
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stroke="currentColor" stroke-width="2.5" stroke-linecap="round">
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<path d="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z"/>
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<path d="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12"/>
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</svg>
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R/Bioconductor
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</span>
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</div>
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<div class="tool-name">markeR</div>
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<p class="tool-desc">
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Toolkit for evaluating gene sets as phenotype markers from gene expression data in R.
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<div class="tool-link-row">
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<a class="tool-link" href="https://doi.org/10.1093/nargab/lqag057"
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target="_blank" rel="noopener">Paper</a>
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<a class="tool-link" href="https://bioconductor.org/packages/release/bioc/html/markeR.html"
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target="_blank" rel="noopener">Bioconductor</a>
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<a class="tool-link" href="https://github.com/DiseaseTranscriptomicsLab/markeR/"
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<a class="tool-link" href="https://diseasetranscriptomicslab.github.io/markeR/articles/markeR.html"
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</div>
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<a class="tool-link launch"
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href="https://bioconductor.org/packages/release/bioc/html/markeR.html"
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href="https://compbio.imm.medicina.ulisboa.pt/app/markeR"
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target="_blank" rel="noopener">Launch app ↗</a>
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</div>
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</div>
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