@@ -67,15 +67,25 @@ <h2 class="section-title fade-up">Bioinformatics tools</h2>
6767 </ div >
6868
6969 <!-- betAS -->
70- < div class ="tool-card fade-up " style ="transition-delay:.05s; " data-tool-type ="webapp ">
71- < span class ="tool-badge webapp ">
72- < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
73- stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
74- < circle cx ="12 " cy ="12 " r ="10 "/>
75- < path d ="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z "/>
76- </ svg >
77- Online Web App
78- </ span >
70+ < div class ="tool-card fade-up " style ="transition-delay:.05s; " data-tool-type ="webapp pkg ">
71+ < div class ="tool-badges ">
72+ < span class ="tool-badge webapp ">
73+ < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
74+ stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
75+ < circle cx ="12 " cy ="12 " r ="10 "/>
76+ < path d ="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z "/>
77+ </ svg >
78+ Online Web App
79+ </ span >
80+ < span class ="tool-badge pkg ">
81+ < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
82+ stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
83+ < path d ="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z "/>
84+ < path d ="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12 "/>
85+ </ svg >
86+ R Package (GitHub)
87+ </ span >
88+ </ div >
7989 < div class ="tool-name "> betAS</ div >
8090 < p class ="tool-desc ">
8191 Intuitive differential alternative splicing analyses using beta
@@ -123,15 +133,25 @@ <h2 class="section-title fade-up">Bioinformatics tools</h2>
123133 </ div >
124134
125135 <!-- psichomics -->
126- < div class ="tool-card fade-up " style ="transition-delay:.15s; " data-tool-type ="webapp ">
127- < span class ="tool-badge webapp ">
128- < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
129- stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
130- < circle cx ="12 " cy ="12 " r ="10 "/>
131- < path d ="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z "/>
132- </ svg >
133- Online Web App
134- </ span >
136+ < div class ="tool-card fade-up " style ="transition-delay:.15s; " data-tool-type ="webapp pkg ">
137+ < div class ="tool-badges ">
138+ < span class ="tool-badge webapp ">
139+ < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
140+ stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
141+ < circle cx ="12 " cy ="12 " r ="10 "/>
142+ < path d ="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z "/>
143+ </ svg >
144+ Online Web App
145+ </ span >
146+ < span class ="tool-badge pkg ">
147+ < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
148+ stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
149+ < path d ="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z "/>
150+ < path d ="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12 "/>
151+ </ svg >
152+ R/Bioconductor
153+ </ span >
154+ </ div >
135155 < div class ="tool-name "> psichomics</ div >
136156 < p class ="tool-desc ">
137157 Alternative splicing quantification, visualisation, and analysis from
@@ -204,15 +224,25 @@ <h2 class="section-title fade-up">Bioinformatics tools</h2>
204224 </ div >
205225
206226 <!-- markeR -->
207- < div class ="tool-card software-only fade-up " style ="transition-delay:.3s; " data-tool-type ="pkg ">
208- < span class ="tool-badge pkg ">
209- < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
210- stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
211- < path d ="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z "/>
212- < path d ="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12 "/>
213- </ svg >
214- Bioconductor Package
215- </ span >
227+ < div class ="tool-card fade-up " style ="transition-delay:.3s; " data-tool-type ="webapp pkg ">
228+ < div class ="tool-badges ">
229+ < span class ="tool-badge webapp ">
230+ < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
231+ stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
232+ < circle cx ="12 " cy ="12 " r ="10 "/>
233+ < path d ="M2 12h20M12 2a15.3 15.3 0 0 1 4 10 15.3 15.3 0 0 1-4 10 15.3 15.3 0 0 1-4-10 15.3 15.3 0 0 1 4-10z "/>
234+ </ svg >
235+ Online Web App
236+ </ span >
237+ < span class ="tool-badge pkg ">
238+ < svg width ="11 " height ="11 " viewBox ="0 0 24 24 " fill ="none "
239+ stroke ="currentColor " stroke-width ="2.5 " stroke-linecap ="round ">
240+ < path d ="m16.5 9.4-9-5.19M21 16V8a2 2 0 0 0-1-1.73l-7-4a2 2 0 0 0-2 0l-7 4A2 2 0 0 0 3 8v8a2 2 0 0 0 1 1.73l7 4a2 2 0 0 0 2 0l7-4A2 2 0 0 0 21 16z "/>
241+ < path d ="M3.27 6.96 12 12.01l8.73-5.05M12 22.08V12 "/>
242+ </ svg >
243+ R/Bioconductor
244+ </ span >
245+ </ div >
216246 < div class ="tool-name "> markeR</ div >
217247 < p class ="tool-desc ">
218248 Toolkit for evaluating gene sets as phenotype markers from gene expression data in R.
@@ -221,14 +251,14 @@ <h2 class="section-title fade-up">Bioinformatics tools</h2>
221251 < div class ="tool-link-row ">
222252 < a class ="tool-link " href ="https://doi.org/10.1093/nargab/lqag057 "
223253 target ="_blank " rel ="noopener "> Paper</ a >
254+ < a class ="tool-link " href ="https://bioconductor.org/packages/release/bioc/html/markeR.html "
255+ target ="_blank " rel ="noopener "> Bioconductor</ a >
224256 < a class ="tool-link " href ="https://github.com/DiseaseTranscriptomicsLab/markeR/ "
225257 target ="_blank " rel ="noopener "> GitHub</ a >
226- < a class ="tool-link " href ="https://diseasetranscriptomicslab.github.io/markeR/articles/markeR.html "
227- target ="_blank " rel ="noopener "> Tutorial</ a >
228258 </ div >
229259 < a class ="tool-link launch "
230- href ="https://bioconductor.org/packages/release/bioc/html/ markeR.html "
231- target ="_blank " rel ="noopener "> Bioconductor ↗</ a >
260+ href ="https://compbio.imm.medicina.ulisboa.pt/app/ markeR "
261+ target ="_blank " rel ="noopener "> Launch app ↗</ a >
232262 </ div >
233263 </ div >
234264
0 commit comments