Back to run mode with plotly

Author: MalloryWittwer

.github/workflows/deploy.yml

@@ -23,7 +23,7 @@ jobs:
         run: |
           python -m pip install marimo
       - name: Export notebook
-        run: marimo export html-wasm marimo_dashboard.py -o wasm --mode edit
+        run: marimo export html-wasm marimo_dashboard.py -o wasm --mode run
       - name: Upload artifact
         uses: actions/upload-pages-artifact@v3
         with:

marimo_dashboard.py

@@ -87,6 +87,10 @@ def scatters_from_mask(mask):
     if "pyodide" in sys.modules:
         import micropip
         await micropip.install("tifffile==2025.5.10")
+        await micropip.install("plotly")
+        import plotly.express as px
+        import plotly.graph_objects as go
+        from plotly.subplots import make_subplots
 
         if not public_folder_path.exists():
             # Download and unzip the public folder from the repository
@@ -99,6 +103,10 @@ def scatters_from_mask(mask):
                 zf.extractall()
 
             print(f"Extracted data in: {public_folder_path}")
+    else:
+        import plotly.express as px
+        import plotly.graph_objects as go
+        from plotly.subplots import make_subplots
 
     challenges = [d.name for d in ground_truths_path.iterdir() if d.is_dir()]