stage: tool bundle merging + workflow cross-references (skill ↔ tool … #16
Workflow file for this run
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| # tier-update.yml — Runs on merge to main when review attestations land. | ||
| # Increments per-collection review counters in contributors.jsonld and | ||
| # re-evaluates the contributor's tier per the collection's curator-criteria.yaml. | ||
| # | ||
| # Spec ref: §9.6 (Automation flows — tier_update.yml) | ||
| # Driver: scripts/tier_update.py | ||
| name: Tier Update | ||
| on: | ||
| push: | ||
| branches: [main] | ||
| paths: | ||
| - 'collections/**/reviews/*.yaml' | ||
| - 'collections/**/reviews/*.yml' | ||
| permissions: | ||
| contents: write | ||
| jobs: | ||
| tier-update: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| fetch-depth: 2 # need before/after to diff this push | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: '3.12' | ||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| pip install pyyaml | ||
| - name: Identify newly added review files in this push | ||
| id: changed | ||
| run: | | ||
| # Diff this push (before -> after) for added review attestations only. | ||
| before="${{ github.event.before }}" | ||
| after="${{ github.sha }}" | ||
| if [ "$before" = "0000000000000000000000000000000000000000" ]; then | ||
| git diff --name-only --diff-filter=A HEAD~1 HEAD \ | ||
| > /tmp/added_reviews.txt 2>/dev/null || \ | ||
| git ls-tree -r --name-only HEAD > /tmp/added_reviews.txt | ||
| else | ||
| git diff --name-only --diff-filter=A "$before" "$after" \ | ||
| > /tmp/added_reviews.txt | ||
| fi | ||
| grep -E '^collections/.+/reviews/.+\.ya?ml$' /tmp/added_reviews.txt \ | ||
| > /tmp/new_review_files.txt || true | ||
| echo "count=$(wc -l < /tmp/new_review_files.txt | tr -d ' ')" >> "$GITHUB_OUTPUT" | ||
| cat /tmp/new_review_files.txt | ||
| - name: Update tier per merged review | ||
| if: steps.changed.outputs.count != '0' | ||
| run: | | ||
| set -euo pipefail | ||
| while IFS= read -r review_file; do | ||
| [ -z "$review_file" ] && continue | ||
| # Parse: collections/<slug>/v<N>/reviews/<doi>.yaml | ||
| slug=$(echo "$review_file" | awk -F/ '{print $2}') | ||
| criteria_file="collections/${slug}/$(echo "$review_file" | awk -F/ '{print $3}')/curator-criteria.yaml" | ||
| [ -f "$criteria_file" ] || criteria_file="templates/curator-criteria.yaml.template" | ||
| orcid=$(python -c "import yaml; d=yaml.safe_load(open('$review_file')); print(d['reviewer']['orcid'])") | ||
| is_self=$(python -c "import yaml; d=yaml.safe_load(open('$review_file')); print('--is-self-authored' if d['reviewer'].get('is_coauthor') else '')") | ||
| python scripts/tier_update.py \ | ||
| --orcid "$orcid" \ | ||
| --collection "$slug" \ | ||
| $is_self \ | ||
| --contributors contributors.jsonld \ | ||
| --criteria "$criteria_file" | ||
| done < /tmp/new_review_files.txt | ||
| - name: Commit and push contributors.jsonld | ||
| if: steps.changed.outputs.count != '0' | ||
| run: | | ||
| if ! git diff --quiet contributors.jsonld; then | ||
| git config user.name "asb-skill-collections-bot" | ||
| git config user.email "bot@holobiomicslab.cnrs.fr" | ||
| git add contributors.jsonld | ||
| git commit -m "chore(tier): auto-update contributor tiers after review merge | ||
| Driver: scripts/tier_update.py · Spec §9.6" | ||
| git push origin main | ||
| fi | ||
