Update chinese_colonial_territories.csv #1
Workflow file for this run
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Run Tests for Sequenzo Pull Requests | |
| on: | |
| pull_request_target: | |
| branches: | |
| - main | |
| jobs: | |
| test: | |
| name: Tests on ${{ matrix.os }}, Python ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| python-version: ['3.9', '3.10', '3.11'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version}} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --prefer-binary numpy scipy | |
| pip install --prefer-binary Cython pybind11 pytest | |
| - name: Build C++ extension first | |
| run: | | |
| python sequenzo/clustering/setup_pam.py build_ext --inplace | |
| python sequenzo/clustering/setup_kmedoids.py build_ext --inplace | |
| - name: Run Tests | |
| run: pytest tests --verbose |