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‎README.md‎

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## Course description
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- https://www.cecam.org/workshop-details/1465
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- [Description provided in the course registration page](https://www.cecam.org/workshop-details/1465)
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## Workshop structure and link to learning materials
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### Module 1
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| Day | Topics |
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| 1 | [NumPy: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/) |
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| 2 | [Pandas: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/) |
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| 1 | [Introduction to Module 2](https://www.cecam.org/workshop-details/1465) |
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| | [ML terminology and ML in Bioinformatics](Day1/0_Introduction_ml_terminology.pdf) |
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| 1 | [NumPy: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/0.Numpy_for_bioinformatics/) |
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| 2 | [Pandas: Fundamentals](hhttps://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/7.Pandas_lesson%20plan/) |
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### Module 2
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- [Introduction to Module 2](https://www.cecam.org/workshop-details/1465)
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| Day | Topics |
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| --- | -------------------------------------------------------------------------------------------------------------- |
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| 1 | [ML terminology and ML in Bioinformatics](Day1/0_Introduction_ml_terminology.pdf) |
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| | [Unsupervised Learning: Clustering (K-Means Clustering, Hierarchical clustering, Clustering evaluation metrics)](Day1/1_Unsupervised_Learning.pdf) |
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| | [Unsupervised Learning: Dimensionality reduction (Principal component analysis - PCA)](Day1/1_Unsupervised_Learning.pdf) |
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| | [Hands-on session demonstrating PCA and clustering in cancer genomics](https://naicno.github.io/BioNT_Module2_handson/1.PCA_n_Clustering/) |

‎content/index.md‎

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## Workshop structure and link to learning materials
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### Module 1
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- [Introduction to Module 1](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/)
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| Day | Topics |
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| --- | -------------------------------------------------------------------------------------------------------------- |
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| 1 | [NumPy: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/0.Numpy_for_bioinformatics/) |
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| 2 | [Pandas: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/7.Pandas_lesson%20plan/) |
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### Module 2
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- [Introduction to Module 2](https://www.cecam.org/workshop-details/1465)
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| Day | Topics |
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| --- | -------------------------------------------------------------------------------------------------------------- |
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| 1 | [NumPy: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/) |
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| 2 | [Pandas: Fundamentals](https://coderefinery.github.io/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets/) |
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| | |
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| 1 | [Introduction to Module 2](https://www.cecam.org/workshop-details/1465) |
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| | [ML terminology and ML in Bioinformatics](Day1/0_Introduction_ml_terminology.pdf) |
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| 1 | [ML terminology and ML in Bioinformatics](Day1/0_Introduction_ml_terminology.pdf) |
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| | [Unsupervised Learning: Clustering (K-Means Clustering, Hierarchical clustering, Clustering evaluation metrics)](Day1/1_Unsupervised_Learning.pdf) |
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| | [Unsupervised Learning: Dimensionality reduction (Principal component analysis - PCA)](Day1/1_Unsupervised_Learning.pdf) |
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| | [Hands-on session demonstrating PCA and clustering in cancer genomics](https://naicno.github.io/BioNT_Module2_handson/1.PCA_n_Clustering/) |

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