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Code Ocean capsule - MOSuite - plot 3D PCA

Development version

v5.0

  • Use MOSuite v0.5.0 (#12, @kelly-sovacool)

v4.0

  • Hide the count subtype parameter and automatically use the voom subtype when plotting normalized counts (#11, @phoman14).

v3.0

  • Sync Code Ocean app panel parameter descriptions with MOSuite package documentation for MOSuite v0.4.1 (#7, @phoman14).
  • Align the PCA color and point size defaults with MOSuite package defaults (#2, @phoman14).
  • Document that color palettes fall back to random colors only when too few colors are provided (#2, @phoman14).
  • Added tests for the plot pca 3D capsule Code Ocean panel and CLI contract (#1, @phoman14).
  • Improved the Code Ocean parameter UI for the plot pca 3D capsule (#1, @phoman14).
  • Use MOSuite v0.3.2. (#3, @kelly-sovacool)

v2.0

  • Use MOSuite v0.3.0.
  • Fix: remove regex_moo parameter from configuration. multiOmicDataSet input files are now required to follow the standardized naming pattern (.*\.rds$).

v1.0

Initial release

https://poc-nci.codeocean.io/capsule/3313117/tree/v1