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Explicitly annotate URI prefixes for non-standard resources - #2951
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cthoyt
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jsstevenson
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seems fine from a technical standpoint 👍
This was referenced Sep 29, 2026
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Some OBO Foundry ontologies do not use OBO PURLs. As of OBOFoundry/OBOFoundry.github.io#2951, these are now made explicit in the metadata of the OBO Foundry. This PR incorporates that data and removes an incomplete custom override. This PR is requires the OBO Foundry to update its metadata before it can be merged
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There are a handful of ontologies in OBO Foundry that don't use standard OBO PURLs. This leads to some inaccuracies in the build files.
This PR adds a new field to capture that. I curated four by hand, I'm not sure if there are some others. Maybe a bioregistry analysis could reveal more, but this is a PoC that would be ready to merge.
Some specifics:
uri_prefixto thevann:preferredNamespaceUripredicate in the manually curated context