README.md

Architecture Index

This index points reviewers to the current Permea Core architecture surfaces. It is navigation only; it does not introduce new architecture or scientific claims.

Start Here

• Architecture design
• Specification
• OSS operating docs map
• Decision records
• Benchmark-first ADR
• Lineage model
• Artifact consistency
• Reports index
• Public review packet
• Evidence map

Layer Entry Points

• Evidence
• Benchmarks
• Benchmark execution
• Datasets
• Research packages
• Signal integration
• Lineage
• Claims

Local Review Commands

python3 scripts/permea_review.py
python3 scripts/permea_artifacts.py
python3 scripts/permea_lineage.py
python3 scripts/permea_validate.py
python3 scripts/validate_permea_artifacts.py

Review Path

README -> QUICKSTART -> REVIEW PACKET -> ARCHITECTURE -> EVIDENCE -> LINEAGE -> CLAIMS -> VALIDATION

Boundary

Architecture docs describe repository structure, artifact surfaces, review paths, and reproducibility expectations. They do not claim biological results, wet-lab validation, clinical efficacy, or solved delivery.