tests

Harden nnUNetV2Runner against code execution #1275

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Run time

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Job	Run time
min-dep (ubuntu-latest, 2.8.0, 3.13)	7m 5s
static-checks (codeformat)	12m 47s
min-dep (ubuntu-latest, 2.8.0, 3.11)	7m 48s
min-dep (ubuntu-latest, 3.10, 2.8.0)	8m 5s
min-dep (ubuntu-latest, 2.8.0, 3.12)	8m 43s
full-dep (ubuntu-latest)	12m 19s
min-dep (ubuntu-latest, 3.10, 2.10.0)	8m 23s
hyena-dep	4m 59s
min-dep (windows-latest, 3.10, 2.8.0)	8m 47s
min-dep (ubuntu-latest, 3.10, 2.9.1)	8m 49s
full-dep (macOS-latest)	58s
static-checks (pyrefly)	12m 47s
packaging	5m 52s
min-dep (macOS-latest, 3.10, 2.8.0)	12m 21s
full-dep (windows-latest)	12m 49s
min-dep (ubuntu-latest, 3.10, 2.11.0)	6m 48s
	2h 19m 20s