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Dataset sources and provenance

Dataset Frozen source used Retrieval / project page Primary citation Role
ESOL DeepChem-hosted copy of Delaney supporting data https://deepchemdata.s3-us-west-1.amazonaws.com/datasets/delaney-processed.csv Delaney (2004), https://doi.org/10.1021/ci034243x Primary regression
BBBP DeepChem/MoleculeNet BBBP CSV https://deepchemdata.s3-us-west-1.amazonaws.com/datasets/BBBP.csv Martins et al. (2012), https://doi.org/10.1021/ci300124c Primary classification
Lipophilicity MoleculeNet/ChEMBL AstraZeneca file https://deepchemdata.s3-us-west-1.amazonaws.com/datasets/Lipophilicity.csv Wu et al. (2018), https://doi.org/10.1039/C7SC02664A No-rule sensitivity
FreeSolv Official MobleyLab database.txt, v0.52 https://github.com/MobleyLab/FreeSolv/blob/master/database.txt Mobley & Guthrie (2014), https://doi.org/10.1007/s10822-014-9747-x No-rule sensitivity
B3DB transfer qc-B3DB classification corpus v1.1.1 https://pypi.org/project/qc-B3DB/ Meng et al. (2021), https://doi.org/10.1038/s41597-021-01069-5 External BBB transfer

The frozen study deliberately used the official MobleyLab FreeSolv file rather than the DeepChem target copy. The B3DB project declares its distributed dataset under CC0; the other datasets retain their original source terms and citation requirements.

The manuscript also discloses an important provenance limitation: the ESOL rule is historically related to the benchmark source data, so the fixed rule is not described as a fully independent external prior.