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  1. MSstats MSstats Public

    R package - MSstats

    R 102 53

  2. MSstatsTMT MSstatsTMT Public

    R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling

    R 31 15

  3. MSstatsShiny MSstatsShiny Public

    R-Shiny GUI integrated with the MSstats package family

    R 21 9

  4. MSstatsPTM MSstatsPTM Public

    Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments

    R 16 3

  5. MSstatsConvert MSstatsConvert Public

    Converter functions for the MSstats package

    R 12 5

  6. Cardinal3-vignettes Cardinal3-vignettes Public

    Vignettes for Cardinal3 paper

    HTML 11 3

Repositories

Showing 10 of 30 repositories
  • MSstats Public

    R package - MSstats

    Vitek-Lab/MSstats's past year of commit activity
    R 102 53 18 4 Updated Sep 19, 2026
  • MSstatsConvertLLM Public

    In development package to replace the converters in MSstatsConvert with (local) LLMs. This work was present at ASMS 2026.

    Vitek-Lab/MSstatsConvertLLM's past year of commit activity
    R 1 0 20 2 Updated Sep 19, 2026
  • Causomic Public

    Causal inference methods for -omics research

    Vitek-Lab/Causomic's past year of commit activity
    Python 2 MIT 4 0 1 Updated Sep 17, 2026
  • Vitek-Lab/MSstatsResponse's past year of commit activity
    R 1 1 0 0 Updated Sep 16, 2026
  • MIe-2026 Public

    May Institute Essentials 2026 — virtual course website

    Vitek-Lab/MIe-2026's past year of commit activity
    HTML 0 0 0 0 Updated Sep 16, 2026
  • MSstatsConvert Public

    Converter functions for the MSstats package

    Vitek-Lab/MSstatsConvert's past year of commit activity
    R 12 5 6 2 Updated Sep 12, 2026
  • MSstatsShiny Public

    R-Shiny GUI integrated with the MSstats package family

    Vitek-Lab/MSstatsShiny's past year of commit activity
    R 21 9 11 1 Updated Sep 9, 2026
  • MSstatsBioNet Public
    Vitek-Lab/MSstatsBioNet's past year of commit activity
    R 2 0 2 2 Updated Sep 1, 2026
  • MSstatsTMT Public

    R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling

    Vitek-Lab/MSstatsTMT's past year of commit activity
    R 31 15 12 4 Updated Aug 31, 2026
  • MSstatsBig Public

    MSstats functionality to handle large DIA datasets. Replaces standard MSstats converters with MSstatsBig converters.

    Vitek-Lab/MSstatsBig's past year of commit activity
    R 2 1 2 1 Updated Aug 7, 2026

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