Issues

• KNN_BBKNN: cuml path hardcodes algorithm="ivfflat" with no failure fallback — a single bbknn failure stalls the whole ensemble

  YosefLab/popV#115 · Filter by author yokoyamtr opened on Jul 7, 2026
  1

• _onclass.py:71 uses literal string 'self.labels_key' instead of attribute self.labels_key

  YosefLab/popV#114 · Filter by author joschkahey opened on May 18, 2026

• _scanvi.py:148 SCANVI.load_query_data missing extend_categories=True rejects unknown_celltype_label

  YosefLab/popV#113 · Filter by author joschkahey opened on May 18, 2026

• ontology_vote_onclass crashes with NetworkXError when voter predicts unknown_celltype_label sentinel

  YosefLab/popV#112 · Filter by author joschkahey opened on May 18, 2026

• Issue with running pipeline since previous update 5 months ago.

  bug
  YosefLab/popV#109 · Filter by author JakeLehle opened on Feb 21, 2026
  15

• Additional voting methods

  enhancement
  YosefLab/popV#99 · Filter by author jpintar opened on Aug 30, 2025
  2

• Support for multi-gene set ensemble

  enhancement
  YosefLab/popV#54 · Filter by author ejarmand opened on Nov 30, 2024
  2