Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
bcbio
/
singlecell-reports
Public template
Notifications
You must be signed in to change notification settings
Fork
2
Star
6
Code
Issues
5
Pull requests
7
Discussions
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Discussions
Actions
Projects
Security and quality
Insights
converted qmd from cellchat
- #22
#22
Open
lijin0303
wants to merge 22 commits into
main
bcbio/singlecell-reports:main
from
cellchat_qmd
bcbio/singlecell-reports:cellchat_qmd
Copy head branch name to clipboard
Conversation
Commits
22
(22)
Checks
Files changed
Open
converted qmd from cellchat
#22
lijin0303
wants to merge 22 commits into
main
bcbio/singlecell-reports:main
from
cellchat_qmd
bcbio/singlecell-reports:cellchat_qmd
Copy head branch name to clipboard
Commits
Commits on Aug 5, 2025
converted qmd from cellchat
lijin0303
authored
d64e403
View commit details
Copy full SHA for d64e403
Browse repository at this point
Commits on Aug 26, 2025
updated converted cellchat qmd
lijin0303
authored
17beb92
View commit details
Copy full SHA for 17beb92
Browse repository at this point
Style code (GHA)
lijin0303
committed
e017b6d
View commit details
Copy full SHA for e017b6d
Browse repository at this point
cellchat qmd action
lijin0303
authored
d80831f
View commit details
Copy full SHA for d80831f
Browse repository at this point
Update system dependencies and Quarto setup
Show description for 6099648
lijin0303
authored
6099648
View commit details
Copy full SHA for 6099648
Browse repository at this point
Add deployment step for cellchat.html
lijin0303
authored
a1a3b23
View commit details
Copy full SHA for a1a3b23
Browse repository at this point
Commits on Aug 28, 2025
Update workflow to install Quarto via conda
Show description for eb0801c
lijin0303
authored
eb0801c
View commit details
Copy full SHA for eb0801c
Browse repository at this point
Simplify directory change in workflow script
lijin0303
authored
d0398a7
View commit details
Copy full SHA for d0398a7
Browse repository at this point
Clean up CellChat analysis code and visualizations
Show description for 4c6d450
lijin0303
authored
4c6d450
View commit details
Copy full SHA for 4c6d450
Browse repository at this point
Remove panel-tabset wrapper from top interactions
lijin0303
authored
851cf4b
View commit details
Copy full SHA for 851cf4b
Browse repository at this point
Remove panel tabset from R code chunk
lijin0303
authored
0ea3b9a
View commit details
Copy full SHA for 0ea3b9a
Browse repository at this point
Add panel tabset option to R code chunk
lijin0303
authored
aefa76c
View commit details
Copy full SHA for aefa76c
Browse repository at this point
Add installation step for presto package
Show description for fcddc64
lijin0303
authored
fcddc64
View commit details
Copy full SHA for fcddc64
Browse repository at this point
Change installation method for presto to devtools
lijin0303
authored
8c0cb15
View commit details
Copy full SHA for 8c0cb15
Browse repository at this point
Add installation step for presto package in workflow
lijin0303
authored
0330d09
View commit details
Copy full SHA for 0330d09
Browse repository at this point
Update presto installation command in workflow
lijin0303
authored
2f89ad9
View commit details
Copy full SHA for 2f89ad9
Browse repository at this point
Commits on Aug 29, 2025
Fix formatting in run_cellchat.yml for GitHub Actions
lijin0303
authored
bb82a79
View commit details
Copy full SHA for bb82a79
Browse repository at this point
Update presto installation method in workflow
lijin0303
authored
6e4dc4f
View commit details
Copy full SHA for 6e4dc4f
Browse repository at this point
Change output format for cellchat rendering
lijin0303
authored
500ba15
View commit details
Copy full SHA for 500ba15
Browse repository at this point
Merge branch 'main' into cellchat_qmd
lpantano
committed
7c328b5
View commit details
Copy full SHA for 7c328b5
Browse repository at this point
trying to trigger new rendering
lpantano
committed
ba6cabf
View commit details
Copy full SHA for ba6cabf
Browse repository at this point
Style code (GHA)
lpantano
committed
cf019f6
View commit details
Copy full SHA for cf019f6
Browse repository at this point
You can’t perform that action at this time.