Issues

• neg_binomial_2_log_lpmf: Precision parameter is 0, Even After Changing Prior

  biocore/BIRDMAn#102 · Filter by author stefanom64 opened on Aug 5, 2025
  2

• How add covariables into default model?

  biocore/BIRDMAn#100 · Filter by author liucong-epi opened on Aug 16, 2024

• Update environment.yml

  biocore/BIRDMAn#95 · Filter by author gibsramen opened on Oct 7, 2023

• Better summary functions

  biocore/BIRDMAn#91 · Filter by author mortonjt opened on Sep 25, 2023

• More informative failure messages

  biocore/BIRDMAn#89 · Filter by author mortonjt opened on Sep 25, 2023
  1

• How to include random variables in the formula

  biocore/BIRDMAn#83 · Filter by author PaulaEterovick opened on Aug 22, 2023
  4

• Kernel dying at model comparison with no apparent reason

  biocore/BIRDMAn#82 · Filter by author PaulaEterovick opened on Aug 18, 2023

• No CmdStan installation found

  biocore/BIRDMAn#81 · Filter by author jolespin opened on Mar 21, 2023
  9

• What is the recommended method for specifying enriched or depleted features?

  biocore/BIRDMAn#80 · Filter by author jolespin opened on Mar 17, 2023
  1

• Add demo to README/docs

  biocore/BIRDMAn#79 · Filter by author gibsramen opened on Aug 13, 2022

• Support for Variational Inference

  biocore/BIRDMAn#66 · Filter by author mortonjt opened on Mar 14, 2022

• Not sure if you have checked out scCODA but this could useful for evaluating BIRDMAn

  biocore/BIRDMAn#65 · Filter by author jolespin opened on Jan 10, 2022

• Bad draw error when running chunks

  biocore/BIRDMAn#59 · Filter by author gibsramen opened on Aug 17, 2021

• concatenate_inferences is slow

  biocore/BIRDMAn#57 · Filter by author mortonjt opened on Jul 31, 2021

• Add tests for parameter capture

  biocore/BIRDMAn#49 · Filter by author gibsramen opened on Jun 29, 2021

• Write docs page on formulas

  biocore/BIRDMAn#33 · Filter by author gibsramen opened on Apr 20, 2021 · v0.1.0

• Add QIIME 2 plugin

  biocore/BIRDMAn#26 · Filter by author gibsramen opened on Apr 7, 2021 · v0.1.0
  5

• Consider sklearn way of fitting

  biocore/BIRDMAn#10 · Filter by author gibsramen opened on Mar 4, 2021 · v0.1.0
  5

• Add attribute to ArviZ objects about model type

  biocore/BIRDMAn#9 · Filter by author gibsramen opened on Mar 4, 2021