Laboratory of Microbial Systems and Bioinformatics

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1. RESCRIPt RESCRIPt Public

   REference Sequence annotation and CuRatIon Pipeline

   Python 103 25

2. q2-assembly q2-assembly Public

   QIIME 2 plugin for (meta)genome assembly.

   Python 2 14

3. q2-annotate q2-annotate Public

   QIIME 2 plugin for functional annotation and taxonomic classification of shotgun metagenomes.

   Python 4 21

4. q2-fondue q2-fondue Public

   Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere

   Python 25 8

5. q2-kmerizer q2-kmerizer Public

   QIIME 2 plugin for generating kmers from biological sequences

   Python 3 3

6. q2-mag q2-mag Public

   Rachis plugin for contig binning and bin quality control.

   Python 5