Repository navigation
Release 0.8.0 - #50
Conversation
A minor release: 10x and STARsolo Matrix Market folders in and out of `adata convert`, velocyto's included, read in two streaming passes; and `import sparse` / `export sparse` on the same codec, which keeps integer counts as integers and refuses the symmetric files it used to half-read. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
There was a problem hiding this comment.
Copilot was unable to review this pull request because the user who requested the review has reached their quota limit.
An organization owner can choose the repository organization as the billing source for reviews requested by members with a paid Copilot license. Learn about Copilot code review billing.
Codex Review SummaryThis comment shows the latest Codex review activity on this pull request.
ℹ️ About Codex in GitHubYour team has set up Codex to review pull requests in this repo. Reviews are triggered when you
Codex reacts with 👀 while any review is running, comments if it has suggestions, and reacts with 👍 once all reviews finish with no findings. |
There was a problem hiding this comment.
💡 Codex Review
Here are some automated review suggestions for this pull request.
Reviewed commit: 8c0e080e5b
ℹ️ About Codex in GitHub
Your team has set up Codex to review pull requests in this repo. Reviews are triggered when you
- Open a pull request for review
- Mark a draft as ready
- Comment "@codex review".
If Codex has suggestions, it will comment; otherwise it will react with 👍.
Codex can also answer questions or update the PR. Try commenting "@codex address that feedback".
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
A minor release. Details are in the
## 0.8.0section ofCHANGELOG.md.adata convertreads and writes 10x and STARsolo Matrix Market folders, velocyto's included (Convert: MTX and 10x MTX folders, import and export (streaming) #24: Groundwork for MTX folders: shared CSR builder and feature table #47, Stream Matrix Market files: a codec behind import/export sparse #48, convert: 10x and STARsolo Matrix Market folders, in and out #49). There's also a benchmark case against scanpy.import sparsekeeps integer counts as integers (it used to make everything float32), sums duplicate entries, and streams.import sparseandexport sparseboth handle.mtx.gz.indptroverflowed past 2^31 entries;recast --layout's streaming transpose grew with the matrix rather than the block.This PR bumps the version to 0.8.0 in
pyproject.tomlanduv.lock, and adds the CHANGELOG entry.🤖 Generated with Claude Code