All pull requests

Pull requests

• Start working on figures

  #1401·anwai98 opened Oct 25, 2026Collaborator·

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• More work for use-cases

  #1400·anwai98 opened Oct 25, 2026Collaborator·

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• Add time series 2d image annotator, expose hidden ais settings in widgets

  #1387·Borease opened Oct 14, 2026·

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• Make GUI and application dependencies optional

  #1384·BennyGinger opened Sep 29, 2026·

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• Ais train optim DO NOT MERGE

  #1371·constantinpape opened Sep 8, 2026Contributor·

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• Add existing Labels layers as SAM mask inputs

  #1314·arthursw opened Jul 31, 2026·

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• Support tracking with existing segmentations in tracking annotator

  #1313·anwai98 opened Jul 30, 2026Collaborator·

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• Some advanced updates to annotator tools

  #1265·anwai98 opened Jun 30, 2026Collaborator·

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• Add support scripts for C. albicans data finetuning

  #1224·anwai98 opened Jun 8, 2026Collaborator·

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• Add preliminary scripts towards uSegment3D integration

  #1179·anwai98 opened Mar 23, 2026Collaborator·

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• Implement better normalization for embedding computation

  #1058·constantinpape opened Jun 5, 2025Contributor·

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• Update training logic to computes loss over logits

  #990·anwai98 opened Apr 7, 2025Collaborator·

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  11

• Implement reproducibility functionality for commit file

  #976·constantinpape opened Mar 28, 2025Contributor·

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• Create pull request template

  #973·anwai98 opened Mar 28, 2025Collaborator·

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• Update issue templates

  #924·anwai98 opened Mar 9, 2025Collaborator·

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• Reactivate training test

  #818·constantinpape opened Dec 21, 2024Contributor·

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  1

• Grid-search after training

  #679·constantinpape opened Aug 27, 2024Contributor·

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• Start to implement segmentation folder for the image series annotator

  #627·constantinpape opened Jun 3, 2024Contributor·

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• Switch to PyPI Trusted Publishing, remove twine

  #614·GenevieveBuckley opened May 23, 2024Collaborator·

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• Multiscale image layer support

  #590·constantinpape opened May 6, 2024Contributor·

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• Bioengine integration

  #513·constantinpape opened Apr 12, 2024Contributor·

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• 109 macos installer

  #164·paulhfu opened Aug 26, 2023Contributor·

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  2