vcf_simplified_post_vcftools-merge.tsv

CHROM	POS	SVTYPE	SVLEN	P15_DR	P15_DV	P15_AF	P30_DR	P30_DV	P30_AF	P50_DR	P50_DV	P50_AF
DQ657948.1	1210	INS	12	246	246	0.5	0	0	0.0	0	0	0.0
DQ657948.1	11375	INS	31	317	417	0.5681198910081744	0	0	0.0	0	0	0.0
DQ657948.1	11384	DEL	-33	363	374	0.5074626865671642	0	0	0.0	0	0	0.0
DQ657948.1	14453	INS	25	302	360	0.5438066465256798	0	0	0.0	0	0	0.0
DQ657948.1	16096	DEL	-22	444	254	0.3638968481375358	0	0	0.0	0	0	0.0
DQ657948.1	19040	DEL	-97	0	0	0.0	2208	83	0.03622872108249672	0	0	0.0
DQ657948.1	20845	DEL	-10	535	68	0.11276948590381426	0	0	0.0	0	0	0.0
DQ657948.1	22398	INS	12	152	250	0.6218905472636815	0	0	0.0	0	0	0.0
DQ657948.1	22620	INS	48	209	180	0.46272493573264784	397	780	0.6627017841971113	0	0	0.0
DQ657948.1	22620	INS	63	379	10	0.02570694087403599	0	0	0.0	0	0	0.0
DQ657948.1	22620	INS	48	0	0	0.0	0	0	0.0	117	1338	0.9195876288659793
DQ657948.1	22620	INS	35	375	14	0.03598971722365039	0	0	0.0	0	0	0.0
DQ657948.1	29470	INS	11	0	0	0.0	0	0	0.0	1250	142	0.10201149425287356
DQ657948.1	29473	INS	24	199	187	0.4844559585492228	0	0	0.0	472	920	0.6609195402298851
DQ657948.1	29505	INS	14	372	19	0.04859335038363171	0	0	0.0	0	0	0.0
DQ657948.1	31256	DEL	-27	192	216	0.5294117647058824	550	644	0.5393634840871022	0	0	0.0
DQ657948.1	32540	DEL	-19	262	171	0.394919168591224	708	451	0.38912855910267474	0	0	0.0
DQ657948.1	32540	DEL	-20	391	42	0.09699769053117784	0	0	0.0	0	0	0.0
DQ657948.1	32540	INS	27	0	0	0.0	0	0	0.0	942	359	0.2759415833973866
DQ657948.1	32540	INS	44	0	0	0.0	0	0	0.0	1269	32	0.024596464258262875
DQ657948.1	32540	INS	29	250	184	0.423963133640553	0	0	0.0	0	0	0.0
DQ657948.1	32540	INS	45	404	30	0.06912442396313365	0	0	0.0	0	0	0.0
DQ657948.1	32540	INS	19	415	19	0.04377880184331797	0	0	0.0	1178	123	0.09454265949269793
DQ657948.1	37879	INS	80	343	54	0.13602015113350127	0	0	0.0	1149	130	0.1016419077404222
DQ657948.1	37879	INS	22	249	148	0.37279596977329976	0	0	0.0	0	0	0.0
DQ657948.1	37879	INS	50	374	23	0.05793450881612091	0	0	0.0	0	0	0.0
DQ657948.1	37879	INS	78	284	113	0.28463476070528965	0	0	0.0	0	0	0.0
DQ657948.1	37879	INS	30	0	0	0.0	763	338	0.3069936421435059	0	0	0.0
DQ657948.1	37879	INS	58	0	0	0.0	964	137	0.12443233424159855	0	0	0.0
DQ657948.1	37879	INS	72	0	0	0.0	820	281	0.25522252497729336	0	0	0.0
DQ657948.1	37879	INS	80	0	0	0.0	852	249	0.22615803814713897	0	0	0.0
DQ657948.1	37879	DEL	-46	0	0	0.0	1011	91	0.08257713248638839	0	0	0.0
DQ657948.1	37879	INS	18	0	0	0.0	0	0	0.0	883	396	0.3096168881939015
DQ657948.1	37879	INS	20	0	0	0.0	0	0	0.0	832	447	0.3494917904612979
DQ657948.1	37879	INS	56	0	0	0.0	0	0	0.0	1153	126	0.0985144644253323
DQ657948.1	37879	INS	74	0	0	0.0	0	0	0.0	1053	226	0.17670054730258014
DQ657948.1	37879	INS	18	337	60	0.15113350125944586	0	0	0.0	0	0	0.0
DQ657948.1	47131	INS	18	194	179	0.47989276139410186	0	0	0.0	804	472	0.36990595611285265
DQ657948.1	49268	DEL	-75	173	189	0.5220994475138122	21	1069	0.9807339449541285	475	784	0.6227164416203336
DQ657948.1	49311	DEL	-80	0	0	0.0	1077	16	0.01463860933211345	0	0	0.0
DQ657948.1	53453	INS	38	188	178	0.48633879781420764	791	303	0.27696526508226693	556	680	0.5501618122977346
DQ657948.1	53453	INS	40	0	0	0.0	1069	25	0.022851919561243144	0	0	0.0
DQ657948.1	53453	INS	41	356	10	0.0273224043715847	0	0	0.0	0	0	0.0
DQ657948.1	59928	INS	10	177	185	0.511049723756906	0	0	0.0	0	0	0.0
DQ657948.1	60281	DEL	-25	168	203	0.5471698113207547	541	520	0.49010367577756836	138	1032	0.882051282051282
DQ657948.1	69696	INS	27	166	151	0.47634069400630913	259	796	0.7545023696682465	49	1032	0.9546716003700277
DQ657948.1	69696	INS	16	0	0	0.0	0	0	0.0	1016	65	0.060129509713228495
DQ657948.1	69713	INS	16	301	19	0.059375	0	0	0.0	0	0	0.0
DQ657948.1	76048	DEL	-66	193	164	0.45938375350140054	215	810	0.7902439024390244	718	361	0.3345690454124189
DQ657948.1	76064	DEL	-56	0	0	0.0	999	26	0.025365853658536587	0	0	0.0
DQ657948.1	83046	INS	39	203	133	0.3958333333333333	415	582	0.5837512537612839	0	0	0.0
DQ657948.1	83046	INS	40	0	0	0.0	856	141	0.14142427281845538	0	0	0.0
DQ657948.1	83046	INS	40	0	0	0.0	0	0	0.0	946	139	0.12811059907834102
DQ657948.1	83046	INS	40	298	38	0.1130952380952381	0	0	0.0	0	0	0.0
DQ657948.1	83107	INS	12	322	13	0.03880597014925373	0	0	0.0	0	0	0.0
DQ657948.1	83107	INS	12	0	0	0.0	865	120	0.1218274111675127	0	0	0.0
DQ657948.1	90594	INS	25	162	140	0.46357615894039733	473	415	0.46734234234234234	0	0	0.0
DQ657948.1	90695	DEL	-15	159	140	0.4682274247491639	222	671	0.7513997760358343	0	0	0.0
DQ657948.1	90974	INS	78	0	0	0.0	759	136	0.15195530726256984	0	0	0.0
DQ657948.1	91042	INS	79	273	30	0.09900990099009901	0	0	0.0	0	0	0.0
DQ657948.1	91118	INS	52	0	0	0.0	886	28	0.030634573304157548	0	0	0.0
DQ657948.1	91154	INS	84	204	105	0.33980582524271846	0	0	0.0	0	0	0.0
DQ657948.1	91154	INS	78	0	0	0.0	0	0	0.0	1014	34	0.03244274809160305
DQ657948.1	91154	INS	84	0	0	0.0	0	0	0.0	925	123	0.11736641221374046
DQ657948.1	91154	INS	84	0	0	0.0	416	498	0.5448577680525164	0	0	0.0
DQ657948.1	91622	DEL	-10	188	129	0.4069400630914827	353	574	0.6192017259978425	0	0	0.0
DQ657948.1	95731	DEL	-11	147	153	0.51	0	0	0.0	0	0	0.0
DQ657948.1	102486	DEL	-12	0	0	0.0	540	336	0.3835616438356164	0	0	0.0
DQ657948.1	120042	INS	18	244	47	0.16151202749140894	590	336	0.36285097192224625	688	261	0.27502634351949423
DQ657948.1	120058	INS	21	0	0	0.0	0	0	0.0	935	14	0.014752370916754479
DQ657948.1	131013	DEL	-33	151	177	0.5396341463414634	25	988	0.9753208292201382	0	0	0.0
DQ657948.1	133271	DEL	-12	0	0	0.0	96	894	0.9030303030303031	0	0	0.0
DQ657948.1	143509	DEL	-24	183	110	0.37542662116040953	915	106	0.10381978452497552	0	0	0.0
DQ657948.1	143509	DEL	-96	124	168	0.5753424657534246	99	921	0.9029411764705882	0	0	0.0
DQ657948.1	155446	DEL	-33	146	206	0.5852272727272727	145	867	0.8567193675889329	0	0	0.0
DQ657948.1	155446	DEL	-66	195	157	0.4460227272727273	832	179	0.17705242334322452	0	0	0.0
DQ657948.1	165060	INS	18	178	153	0.4622356495468278	243	668	0.7332601536772777	0	0	0.0
DQ657948.1	165060	INS	20	0	0	0.0	840	71	0.07793633369923161	0	0	0.0
DQ657948.1	165081	INS	21	314	17	0.0513595166163142	0	0	0.0	0	0	0.0
DQ657948.1	177568	DEL	-36	291	33	0.10185185185185185	379	560	0.5963791267305645	0	0	0.0
DQ657948.1	177568	DEL	-48	227	97	0.2993827160493827	622	317	0.33759318423855167	0	0	0.0
DQ657948.1	177570	DEL	-76	201	121	0.37577639751552794	0	0	0.0	0	0	0.0
DQ657948.1	177570	DEL	-80	228	94	0.2919254658385093	0	0	0.0	0	0	0.0
DQ657948.1	177576	DEL	-42	0	0	0.0	872	64	0.06837606837606838	0	0	0.0
DQ657948.1	178820	DEL	-12	149	173	0.5372670807453416	0	0	0.0	0	0	0.0
DQ657948.1	186552	DEL	-11	148	195	0.5685131195335277	0	0	0.0	0	0	0.0
DQ657948.1	188010	DEL	-24	147	194	0.5689149560117303	97	884	0.9011213047910296	0	0	0.0
DQ657948.1	188695	INS	24	180	175	0.49295774647887325	186	811	0.8134403209628887	629	468	0.4266180492251595
DQ657948.1	188695	INS	18	0	0	0.0	859	138	0.13841524573721165	0	0	0.0
DQ657948.1	188695	INS	12	0	0	0.0	0	0	0.0	1021	76	0.06927985414767548
DQ657948.1	188695	INS	18	333	22	0.061971830985915494	0	0	0.0	0	0	0.0
DQ657948.1	192550	INS	24	171	167	0.4940828402366864	0	0	0.0	493	558	0.5309229305423406
DQ657948.1	192550	INS	24	0	0	0.0	162	821	0.8351983723296033	0	0	0.0
DQ657948.1	192550	INS	19	0	0	0.0	909	74	0.0752797558494405	0	0	0.0
DQ657948.1	203513	DEL	-22	190	170	0.4722222222222222	236	800	0.7722007722007722	0	0	0.0
DQ657948.1	203527	DEL	-13	342	18	0.05	857	179	0.17277992277992277	0	0	0.0
DQ657948.1	210810	DEL	-18	176	160	0.47619047619047616	192	893	0.8230414746543778	0	0	0.0
DQ657948.1	210810	DEL	-27	162	174	0.5178571428571429	0	0	0.0	0	0	0.0
DQ657948.1	210816	DEL	-21	0	0	0.0	900	185	0.17050691244239632	0	0	0.0
DQ657948.1	216443	INS	90	178	168	0.48554913294797686	0	0	0.0	0	0	0.0
DQ657948.1	216443	INS	99	0	0	0.0	0	0	0.0	66	1107	0.9437340153452686
DQ657948.1	216443	INS	72	0	0	0.0	0	0	0.0	1086	87	0.0741687979539642
DQ657948.1	216552	INS	79	325	20	0.057971014492753624	0	0	0.0	0	0	0.0
DQ657948.1	216552	INS	81	0	0	0.0	119	966	0.8903225806451613	0	0	0.0
DQ657948.1	216552	INS	78	0	0	0.0	934	151	0.1391705069124424	0	0	0.0
DQ657948.1	218453	DEL	-18	325	38	0.1046831955922865	0	0	0.0	0	0	0.0
DQ657948.1	218460	DEL	-11	0	0	0.0	746	368	0.3303411131059246	0	0	0.0
DQ657948.1	228198	INS	74	173	211	0.5494791666666666	0	1151	1.0	0	0	0.0
DQ657948.1	228198	INS	74	0	0	0.0	0	0	0.0	0	1241	1.0
DQ657948.1	228217	INS	97	0	0	0.0	1128	17	0.014847161572052401	0	0	0.0
DQ657948.1	228273	INS	50	0	0	0.0	0	0	0.0	1225	12	0.009700889248181084
DQ657948.1	229930	DEL	-26	0	0	0.0	1106	44	0.03826086956521739	0	0	0.0
DQ657948.1	229939	DEL	-17	180	197	0.5225464190981433	0	1169	1.0	0	0	0.0
DQ657948.1	230496	INS	15	193	194	0.5012919896640827	120	1049	0.8973481608212147	356	935	0.7242447714949651
DQ657948.1	231446	INS	12	185	202	0.5219638242894057	115	1064	0.9024597116200169	40	1256	0.9691358024691358
DQ657948.1	240001	DEL	-21	264	143	0.35135135135135137	369	799	0.6840753424657534	0	0	0.0
DQ657948.1	240022	DEL	-13	0	0	0.0	842	326	0.2791095890410959	0	0	0.0
DQ657948.1	240026	DEL	-13	343	64	0.15724815724815724	0	0	0.0	0	0	0.0
DQ657948.1	249095	INS	10	238	171	0.4180929095354523	0	0	0.0	856	432	0.33540372670807456
DQ657948.1	254131	DEL	-18	198	222	0.5285714285714286	0	0	0.0	0	0	0.0
DQ657948.1	256462	INS	39	206	233	0.530751708428246	48	1195	0.9613837489943685	0	1501	1.0
DQ657948.1	256462	INS	40	0	0	0.0	1064	179	0.14400643604183427	0	0	0.0
DQ657948.1	256462	INS	40	419	20	0.04555808656036447	0	0	0.0	0	0	0.0
DQ657948.1	265177	INS	12	29	376	0.928395061728395	0	0	0.0	0	0	0.0
DQ657948.1	270645	DEL	-15	211	163	0.4358288770053476	0	0	0.0	0	0	0.0
DQ657948.1	270719	INS	34	305	67	0.18010752688172044	1032	288	0.21818181818181817	0	0	0.0
DQ657948.1	270829	INS	19	221	157	0.41534391534391535	0	0	0.0	0	0	0.0
DQ657948.1	271616	INS	12	184	182	0.4972677595628415	0	0	0.0	0	0	0.0
DQ657948.1	272012	DEL	-24	187	176	0.48484848484848486	178	1155	0.8664666166541636	0	0	0.0
DQ657948.1	272039	DEL	-15	0	0	0.0	1233	100	0.07501875468867217	0	0	0.0