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Merge pull request #1163 from fls-bioinformatics-core/qc-report-fix-1… Python CI #2346: Commit f096e96 pushed by pjbriggs
50m 8s devel
devel
50m 8s
Fix reporting of '#reads/cell' (average reads per cell) in QC reports for multiplexes 10x Genomics data Python CI #2345: Pull request #1163 synchronize by pjbriggs
52m 16s qc-report-fix-10x-multiplexing-reads-per-cell
qc-report-fix-10x-multiplexing-reads-per-cell
52m 16s
qc/reporting: trap for errors calculating #reads/cell for multiplexed… Python CI #2344: Commit 7eebe2b pushed by pjbriggs
51m 21s qc-report-fix-10x-multiplexing-reads-per-cell
qc-report-fix-10x-multiplexing-reads-per-cell
51m 21s
Fix reporting of '#reads/cell' (average reads per cell) in QC reports for multiplexes 10x Genomics data Python CI #2343: Pull request #1163 opened by pjbriggs
51m 17s qc-report-fix-10x-multiplexing-reads-per-cell
qc-report-fix-10x-multiplexing-reads-per-cell
51m 17s
qc/reporting: update reporting of 10x multiplexed '#reads/cell'. Python CI #2342: Commit d69b4e7 pushed by pjbriggs
53m 1s qc-report-fix-10x-multiplexing-reads-per-cell
qc-report-fix-10x-multiplexing-reads-per-cell
53m 1s
Merge pull request #1159 from fls-bioinformatics-core/abstract-updati… Python CI #2341: Commit d99dcbc pushed by pjbriggs
51m 7s devel
devel
51m 7s
Consolidate path updating functionality in 'archive', 'clone' and 'update' commands Python CI #2340: Pull request #1159 synchronize by pjbriggs
52m 7s abstract-updating-functionality
abstract-updating-functionality
52m 7s
commands/update_cmd: refactor 'update' to use the AutoProcess 'sync_p… Python CI #2339: Commit 7825a35 pushed by pjbriggs
49m 38s abstract-updating-functionality
abstract-updating-functionality
49m 38s
Consolidate path updating functionality in 'archive', 'clone' and 'update' commands Python CI #2338: Pull request #1159 synchronize by pjbriggs
54m 10s abstract-updating-functionality
abstract-updating-functionality
54m 10s
commands/update_cmd: refactor to use AutoProcess 'sync_project_metada… Python CI #2337: Commit 803725e pushed by pjbriggs
51m 11s abstract-updating-functionality
abstract-updating-functionality
51m 11s
Consolidate path updating functionality in 'archive', 'clone' and 'update' commands Python CI #2336: Pull request #1159 opened by pjbriggs
52m 28s abstract-updating-functionality
abstract-updating-functionality
52m 28s
Python CI Python CI #2335: by pjbriggs
54m 8s abstract-updating-functionality
abstract-updating-functionality
54m 8s
Merge pull request #1158 from fls-bioinformatics-core/refactor-autopr… Python CI #2334: Commit 8042c64 pushed by pjbriggs
52m 36s devel
devel
52m 36s
Refactor how command functionality is attached to 'AutoProcess' class Python CI #2333: Pull request #1158 synchronize by pjbriggs
52m 33s refactor-autoprocess-cli-commands
refactor-autoprocess-cli-commands
52m 33s
auto_processor: tidying (remove redundant imports etc). Python CI #2332: Commit b5b4db1 pushed by pjbriggs
51m 58s refactor-autoprocess-cli-commands
refactor-autoprocess-cli-commands
51m 58s
Refactor how command functionality is attached to 'AutoProcess' class Python CI #2331: Pull request #1158 opened by pjbriggs
50m 9s refactor-autoprocess-cli-commands
refactor-autoprocess-cli-commands
50m 9s
auto_processor & cli/auto_process: refactor attaching commands to Aut… Python CI #2330: Commit 51433a1 pushed by pjbriggs
51m 26s refactor-autoprocess-cli-commands
refactor-autoprocess-cli-commands
51m 26s
Merge pull request #1157 from fls-bioinformatics-core/make_fastqs-10x… Python CI #2329: Commit 2a6810b pushed by pjbriggs
50m 43s devel
devel
50m 43s
'make_fastqs': enable 10x multiome and ATAC Fastq generation to operate with Illumina indexes Python CI #2328: Pull request #1157 synchronize by pjbriggs
52m 31s make_fastqs-10x_multiome-use-illumina-indexes
make_fastqs-10x_multiome-use-illumina-indexes
52m 31s
Update documentation for 10x multiome Fastq generation. Python CI #2327: Commit 8ed98cf pushed by pjbriggs
52m 11s make_fastqs-10x_multiome-use-illumina-indexes
make_fastqs-10x_multiome-use-illumina-indexes
52m 11s
Merge pull request #1154 from fls-bioinformatics-core/update-cmd-hand… Python CI #2326: Commit d603584 pushed by pjbriggs
50m 43s devel
devel
50m 43s
'make_fastqs': enable 10x multiome and ATAC Fastq generation to operate with Illumina indexes Python CI #2325: Pull request #1157 opened by pjbriggs
52m 58s make_fastqs-10x_multiome-use-illumina-indexes
make_fastqs-10x_multiome-use-illumina-indexes
52m 58s
commands/make_fastqs_cmd: add unit tests for 10x protocols using Illu… Python CI #2324: Commit f33c2ac pushed by pjbriggs
51m 52s make_fastqs-10x_multiome-use-illumina-indexes
make_fastqs-10x_multiome-use-illumina-indexes
51m 52s
'update': extend to handle inconsistencies between 'projects.info' and contents of analysis directory Python CI #2323: Pull request #1154 synchronize by pjbriggs
50m 19s update-cmd-handle-inconsistent-projects.info
update-cmd-handle-inconsistent-projects.info
50m 19s
commands/update_cmd: emit warning if no operations were requested. Python CI #2322: Commit de9bd1d pushed by pjbriggs
49m 55s update-cmd-handle-inconsistent-projects.info
update-cmd-handle-inconsistent-projects.info
49m 55s