Merge pull request #1084 from fls-bioinformatics-core/settings-remove-redundant-archive-log-parameter

Remove redundant 'archive.log' parameter from configuration

Author: pjbriggs

auto_process_ngs/settings.py

@@ -1041,7 +1041,6 @@ def __init__(self, settings_file=None, resolve_undefined=True):
                              'stats': jobrunner,
                              'transfer_data': jobrunner },
                 "archive": { "dirn": str,
-                             "log": str,
                              "group": str,
                              "chmod": str,
                              "logging_file": path },

auto_process_ngs/test/test_settings.py

@@ -1040,7 +1040,7 @@ def test_sample_settings_file(self):
         self.assertTrue(isinstance(s.runners.qc,SimpleJobRunner))
         # Archiving
         self.assertEqual(s.archive.dirn,None)
-        self.assertEqual(s.archive.log,None)
+        self.assertEqual(s.archive.logging_file,None)
         self.assertEqual(s.archive.group,None)
         self.assertEqual(s.archive.chmod,None)
         # QC reporting