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auto_process_ngs/qc/pipeline.py
@@ -61,6 +61,7 @@
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from ..tenx.multiome import MultiomeLibraries
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from ..tenx.utils import add_cellranger_args
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from ..utils import get_organism_list
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+from ..utils import normalise_organism_name
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from .modules.cellranger_atac_count import CellrangerAtacCount
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from .modules.cellranger_arc_count import CellrangerArcCount
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from .modules.cellranger_count import CellrangerCount
@@ -80,7 +81,6 @@
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from .reporting import report as reportqc
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from .utils import get_bam_basename
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from .utils import get_seq_data_samples
-from .utils import normalise_organism_name
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from .utils import set_cell_count_for_project
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from .verification import verify_project
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