Update 10x Chromium 3' OCM application support and add new QC protocol - #1169
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Consolidates the two OCM applications into a single definition and updates default QC protocol to '10x_OCM'.
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Updates the application definition for 10x Chromium 3' OCM data (to combine the two existing defintions into a single definition).
Also implements a new QC protocol
10x_OCMfor these type of data which includes thecellranger_multiQC module, and makes this the default for the updated application.Includes updates to the
Mock10xPackageExeclass (in themockmodule) to mimick outputs for OCM data (in order to implement tests for the new protocol), and other minor updates to thecellranger multiconfig file handling to deal with the templates for OCM data.Closes #1156.