OpenFUSIONToolkit/.github/workflows/cov_build.yaml at main · hansec/OpenFUSIONToolkit · GitHub

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name: Coverage Build

on:
  push:
    branches:
      - main
      - cov_debug
  pull_request:
    types: [opened, synchronize, reopened, ready_for_review]

concurrency:
  group: cov-${{ github.ref }}
  cancel-in-progress: ${{ contains(github.ref, 'pull/')}}

jobs:
  build:
    if: (github.event_name != 'pull_request' || github.event.pull_request.draft == false) && github.repository == 'OpenFUSIONToolkit/OpenFUSIONToolkit'
    name: Code coverage
    runs-on: ubuntu-22.04
    env:
      CC: gcc-12
      CXX: g++-12
      FC: gfortran-12
      GCOV: gcov-12
      OMP_NUM_THREADS: 1

    steps:
    - name: Checkout repo
      uses: actions/checkout@v5

    - name: Install prerequisites
      run: |
        sudo apt-get -y install lcov
        python3 -m venv ${{ github.workspace }}/oft_venv
        source ${{ github.workspace }}/oft_venv/bin/activate
        python -m pip install pytest coverage numpy scipy h5py netcdf4 matplotlib

    - name: Cache external libraries
      id: cache-ext-libs
      uses: actions/cache@v5
      with:
        path: builds
        key: cov_build-${{ hashFiles('src/utilities/build_libs.py') }}

    - name: Create build dir
      if: ${{ steps.cache-ext-libs.outputs.cache-hit != 'true' }}
      run: mkdir builds

    - name: Check compilers
      run: |
        $CC --version
        $CXX --version
        $FC --version
        $GCOV --version

    - name: Build external
      shell: bash
      timeout-minutes: 60
      working-directory: builds
      run: >
        python3 ../src/utilities/build_libs.py --no_dl_progress --nthread=4
        --build_mpich=1 --build_arpack=1 --build_petsc=1 --petsc_version=3.23 --petsc_openmp=1
        --build_cmake=1 --oft_build_tests=1 --oft_build_coverage

    - name: Upload library failure log
      uses: actions/upload-artifact@v6
      if: failure()
      with:
        name: Library failure log
        path: builds/build/build_error.log

    - name: Configure OFT
      shell: bash
      working-directory: builds
      run: |
        source ${{ github.workspace }}/oft_venv/bin/activate
        bash config_cmake.sh

    - name: Build OFT
      shell: bash
      working-directory: builds/build_release
      run: make

    - name: Test OFT
      shell: bash
      timeout-minutes: 120
      working-directory: builds/build_release
      run: |
        source ${{ github.workspace }}/oft_venv/bin/activate
        make test

    - name: Fixup cache
      shell: bash
      working-directory: builds
      run: |
        rm -rf build
        rm -rf petsc*

    - name: Generate coverage report (GCOV)
      shell: bash
      working-directory: builds/build_release
      run: |
        lcov -c --directory . --output-file main_coverage.info --gcov-tool $GCOV
        lcov --ignore-errors unused -r main_coverage.info -o cleaned_coverage.txt '/opt/*' '/usr/*'
        lcov -l cleaned_coverage.txt

    - name: Generate coverage report (Python)
      shell: bash
      working-directory: builds/build_release/tests
      run: |
        source ${{ github.workspace }}/oft_venv/bin/activate
        coverage combine . grid lin_alg fem physics
        coverage report
        coverage xml

    - name: Upload coverage report to Codecov
      uses: codecov/codecov-action@v6
      with:
        files: builds/build_release/cleaned_coverage.txt,builds/build_release/tests/coverage.xml
        token: ${{ secrets.CODECOV_TOKEN }}
        report_type: coverage
        disable_search: true
        plugin: noop
        verbose: true