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1. john-collins-bioinformatics john-collins-bioinformatics Public

   Multidisciplinary personal site and research portfolio spanning bioinformatics, scientific software, computational biology, music, writing, and interactive design.

   TypeScript 1

2. giab-wes-nextflow giab-wes-nextflow Public

   GIAB HG001 WES: a dual-caller Nextflow benchmark and evidence explorer

   Python

3. cellular-response-dynamics cellular-response-dynamics Public

   A computational research program for discovering transferable structure in cellular responses to perturbation.

   Python

4. genome-evidence genome-evidence Public

   A reproducible, evidence-aware personal genomics platform integrating genotype observations, statistical inference, external biological evidence, phenotype data, and uncertainty.

   Python

5. chatgpt-archive-compiler chatgpt-archive-compiler Public

   Local-first compiler for ChatGPT data exports: parse, analyze, redact, and render conversation archives into book-quality PDFs.

   Python

6. midiscore midiscore Public

   Elegantly transform raw, live-recorded MIDI piano improvisations into engraver-grade scores.

   Python