Move coverage configuration to pyproject.toml

Author: marcelm

pyproject.toml

@@ -85,3 +85,23 @@ ignore = [
     "RUF022",  # `__all__` is not sorted
     "RUF023",  # `SingleMatch.__slots__` is not sorted
 ]
+
+[tool.coverage.run]
+branch = true
+parallel = true
+concurrency = ["multiprocessing"]
+source_pkgs = ["cutadapt"]
+source = ["tests"]
+
+[tool.coverage.report]
+precision = 1
+exclude_also = [
+    "def __repr__",
+    "@overload",
+]
+
+[tool.coverage.paths]
+source = [
+    "src/",
+    "*/site-packages/",
+]

tox.ini

@@ -38,22 +38,3 @@ commands = mypy src/
 deps = black==26.5.1
 skip_install = true
 commands = black --check src/ tests/ setup.py
-
-[coverage:run]
-branch = True
-parallel = True
-concurrency = multiprocessing
-source_pkgs = cutadapt
-source = tests
-
-[coverage:paths]
-source =
-    src/
-    */site-packages/
-
-[coverage:report]
-precision = 1
-exclude_lines =
-    pragma: no cover
-    def __repr__
-    raise NotImplementedError