Bioinformatics project for my BCs Thesis @ FER, University of Zagreb (2016/2017).
- analysis of metagenomic samples obtained by Nanopore-based sequencing technology
Link to a course site: http://www.fer.unizg.hr/en/course/bscthe
- written in Python 3.5
- uses graphmap for mapping reads (https://github.com/isovic/graphmap)
- uses the EM algorithm to identify the species present in a sample