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Replace temporary IDs by definitive IDs and reserialize.
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Lines changed: 30 additions & 28 deletions

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‎src/ontology/cl-edit.owl‎

Lines changed: 30 additions & 28 deletions
Original file line numberDiff line numberDiff line change
@@ -2337,6 +2337,8 @@ Declaration(Class(obo:CL_0020077))
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Declaration(Class(obo:CL_0020078))
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Declaration(Class(obo:CL_0020079))
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Declaration(Class(obo:CL_0020080))
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Declaration(Class(obo:CL_0020081))
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Declaration(Class(obo:CL_0020082))
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Declaration(Class(obo:CL_0700009))
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Declaration(Class(obo:CL_1000001))
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Declaration(Class(obo:CL_1000022))
@@ -26554,6 +26556,34 @@ SubClassOf(obo:CL_0020080 ObjectSomeValuesFrom(obo:RO_0002215 obo:GO_0042167))
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SubClassOf(obo:CL_0020080 ObjectSomeValuesFrom(obo:RO_0002215 obo:GO_1903988))
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SubClassOf(obo:CL_0020080 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000015138))
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# Class: obo:CL_0020081 (hepatopancreas resorptive cell)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") obo:IAO_0000115 obo:CL_0020081 "An epithelial cell of the decapod crustacean hepatopancreas tubule. Resorptive cells are the primary site of nutrient absorption and storage.")
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AnnotationAssertion(obo:IAO_0000233 obo:CL_0020081 "https://github.com/obophenotype/cell-ontology/issues/3688")
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AnnotationAssertion(terms:contributor obo:CL_0020081 <https://orcid.org/0009-0002-8634-7138>)
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AnnotationAssertion(terms:creator obo:CL_0020081 "Claude")
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AnnotationAssertion(terms:date obo:CL_0020081 "2026-09-09T10:27:00Z"^^xsd:dateTime)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_0020081 "R-cell")
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") oboInOwl:hasRelatedSynonym obo:CL_0020081 "resorptive cell")
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AnnotationAssertion(rdfs:label obo:CL_0020081 "hepatopancreas resorptive cell")
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SubClassOf(obo:CL_0020081 obo:CL_0000066)
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SubClassOf(obo:CL_0020081 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0010266))
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SubClassOf(obo:CL_0020081 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_6683))
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# Class: obo:CL_0020082 (hepatopancreas fibrillar cell)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") obo:IAO_0000115 obo:CL_0020082 "An epithelial cell of the decapod crustacean hepatopancreas tubule. Fibrillar cells synthesize and secrete digestive enzymes.")
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AnnotationAssertion(obo:IAO_0000233 obo:CL_0020082 "https://github.com/obophenotype/cell-ontology/issues/3688")
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AnnotationAssertion(terms:contributor obo:CL_0020082 <https://orcid.org/0009-0002-8634-7138>)
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AnnotationAssertion(terms:creator obo:CL_0020082 "Claude")
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AnnotationAssertion(terms:date obo:CL_0020082 "2026-09-09T10:27:00Z"^^xsd:dateTime)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_0020082 "F-cell")
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") oboInOwl:hasRelatedSynonym obo:CL_0020082 "fibrillar cell")
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AnnotationAssertion(rdfs:label obo:CL_0020082 "hepatopancreas fibrillar cell")
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SubClassOf(obo:CL_0020082 obo:CL_0000066)
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SubClassOf(obo:CL_0020082 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0010266))
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SubClassOf(obo:CL_0020082 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_6683))
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# Class: obo:CL_0700009 (obsolete kidney collecting duct beta-intercalated cell)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:24051376") Annotation(oboInOwl:hasDbXref "PMID:31300091") Annotation(oboInOwl:hasDbXref "PMID:32016094") obo:IAO_0000115 obo:CL_0700009 "OBSOLETE. A renal beta-intercalated cell that is part of the cortical collecting duct. The medullary collecting duct does not contain the renal beta-intercalated cell type.")
@@ -36521,34 +36551,6 @@ SubClassOf(obo:CL_7770006 obo:CL_0002367)
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SubClassOf(obo:CL_7770006 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_9606))
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SubClassOf(obo:CL_7770006 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_Q9UIK5))
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# Class: obo:CL_9900001 (hepatopancreas resorptive cell)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") obo:IAO_0000115 obo:CL_9900001 "An epithelial cell of the decapod crustacean hepatopancreas tubule. Resorptive cells are the primary site of nutrient absorption and storage.")
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AnnotationAssertion(obo:IAO_0000233 obo:CL_9900001 "https://github.com/obophenotype/cell-ontology/issues/3688")
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AnnotationAssertion(terms:contributor obo:CL_9900001 <https://orcid.org/0009-0002-8634-7138>)
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AnnotationAssertion(terms:creator obo:CL_9900001 "Claude")
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AnnotationAssertion(terms:date obo:CL_9900001 "2026-09-09T10:27:00Z"^^xsd:dateTime)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") oboInOwl:hasRelatedSynonym obo:CL_9900001 "resorptive cell")
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_9900001 "R-cell")
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AnnotationAssertion(rdfs:label obo:CL_9900001 "hepatopancreas resorptive cell")
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SubClassOf(obo:CL_9900001 obo:CL_0000066)
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SubClassOf(obo:CL_9900001 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0010266))
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SubClassOf(obo:CL_9900001 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_6683))
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# Class: obo:CL_9900002 (hepatopancreas fibrillar cell)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") obo:IAO_0000115 obo:CL_9900002 "An epithelial cell of the decapod crustacean hepatopancreas tubule. Fibrillar cells synthesize and secrete digestive enzymes.")
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AnnotationAssertion(obo:IAO_0000233 obo:CL_9900002 "https://github.com/obophenotype/cell-ontology/issues/3688")
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AnnotationAssertion(terms:contributor obo:CL_9900002 <https://orcid.org/0009-0002-8634-7138>)
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AnnotationAssertion(terms:creator obo:CL_9900002 "Claude")
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AnnotationAssertion(terms:date obo:CL_9900002 "2026-09-09T10:27:00Z"^^xsd:dateTime)
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") oboInOwl:hasRelatedSynonym obo:CL_9900002 "fibrillar cell")
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AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35096009") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_9900002 "F-cell")
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AnnotationAssertion(rdfs:label obo:CL_9900002 "hepatopancreas fibrillar cell")
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SubClassOf(obo:CL_9900002 obo:CL_0000066)
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SubClassOf(obo:CL_9900002 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0010266))
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SubClassOf(obo:CL_9900002 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_6683))
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# Class: obo:CP_0000000 (obsolete CP:0000000)
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AnnotationAssertion(obo:IAO_0100001 obo:CP_0000000 obo:CL_0017500)

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