Skip to content

NTR: crypt top colonocyte (closes #3756) #3757

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
ai4c-agent wants to merge 1 commit into from
Closed

NTR: crypt top colonocyte (closes #3756) #3757

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 12 additions & 0 deletions src/ontology/cl-edit.owl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3368,6 +3368,7 @@ Declaration(Class(obo:CL_7770003))
Declaration(Class(obo:CL_7770004))
Declaration(Class(obo:CL_7770005))
Declaration(Class(obo:CL_7770006))
Declaration(Class(obo:CL_9900001))
Declaration(Class(obo:CP_0000000))
Declaration(Class(obo:CP_0000025))
Declaration(Class(obo:CP_0000027))
Expand Down Expand Up @@ -36551,6 +36552,17 @@ SubClassOf(obo:CL_7770006 obo:CL_0002367)
SubClassOf(obo:CL_7770006 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_9606))
SubClassOf(obo:CL_7770006 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_Q9UIK5))

# Class: obo:CL_9900001 (crypt top colonocyte)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35530046") obo:IAO_0000115 obo:CL_9900001 "A mature, terminally differentiated colonic absorptive epithelial cell located at the top of the crypt (colonic surface epithelium), marked by high expression of AQP8 together with SLC26A3, CEACAM5, CEACAM7, GUCA2A, and TFF1. Represents the fully matured end-state of the colonocyte differentiation trajectory. Identified by sub-clustering analysis in the Human Gut Cell Atlas (HGCA) v1.")
AnnotationAssertion(terms:creator obo:CL_9900001 "Claude")
AnnotationAssertion(terms:date obo:CL_9900001 "2026-09-28T13:46:34Z"^^xsd:dateTime)
AnnotationAssertion(obo:IAO_0000233 obo:CL_9900001 "https://github.com/obophenotype/cell-ontology/issues/3756")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35530046") oboInOwl:hasRelatedSynonym obo:CL_9900001 "colonocytes late")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35530046") oboInOwl:hasRelatedSynonym obo:CL_9900001 "surface colonocyte")
AnnotationAssertion(rdfs:label obo:CL_9900001 "crypt top colonocyte")
SubClassOf(obo:CL_9900001 obo:CL_1000347)

# Class: obo:CP_0000000 (obsolete CP:0000000)

AnnotationAssertion(obo:IAO_0100001 obo:CP_0000000 obo:CL_0017500)
Expand Down
Loading