[mkeays]

Added a new general class for renin secreting kidney vascular associated smooth muscle cells, and added SubClass Of relationship to juxtaglomerular granular cell. Also made a few other edits to try and simplify things.

[dosumis]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file) (for c9c678c)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2026-10-21/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/master-base/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2026-10-21/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/pr-base/cl-base.owl

Ontology imports

Ontology annotations

juxtaglomerular granular cell http://purl.obolibrary.org/obo/CL_0000648

Removed

• juxtaglomerular granular cell label "kidney granular cell"

• juxtaglomerular granular cell EquivalentTo secretory cell and (BFO_0000050 some UBERON_0002113) and (RO_0002215 some GO_0002001)

• juxtaglomerular granular cell SubClassOf protein secreting cell

• juxtaglomerular granular cell SubClassOf smooth muscle cell

• juxtaglomerular granular cell SubClassOf RO_0002215 some GO_0002001

Added

• juxtaglomerular granular cell contributor "https://orcid.org/0000-0003-2034-601X"

• juxtaglomerular granular cell label "juxtaglomerular granular cell"

• juxtaglomerular granular cell SubClassOf renin secreting kidney vascular associated smooth muscle cell

renin secreting kidney vascular associated smooth muscle cell http://purl.obolibrary.org/obo/CL_0019004

Added

• Class: renin secreting kidney vascular associated smooth muscle cell

• renin secreting kidney vascular associated smooth muscle cell contributor "https://orcid.org/0000-0003-2034-601X"

• renin secreting kidney vascular associated smooth muscle cell IAO_0000115 "A vascular associated smooth muscle cell that is part of the kidney and is capable of secreting renin."

  • hasDbXref "PMID:35511367"

• renin secreting kidney vascular associated smooth muscle cell description "Some vascular associated smooth muscle cells in the kidney are capable of producing, storing, and secreting renin in response to homeostatic threats to blood pressure or sodium balance. Usually, the juxtaglomerular granular (JG) cells are the only ones that do this, but in some cases, when the demand for renin cannot be met by the JG cells, other vascular associated smooth muscle cells in the kidney are also recruited for renin secretion."

  • hasDbXref "PMID:35511367"

• renin secreting kidney vascular associated smooth muscle cell label "renin secreting kidney vascular associated smooth muscle cell"@en

• renin secreting kidney vascular associated smooth muscle cell SubClassOf protein secreting cell

• renin secreting kidney vascular associated smooth muscle cell SubClassOf vascular associated smooth muscle cell

• renin secreting kidney vascular associated smooth muscle cell SubClassOf kidney cell

• renin secreting kidney vascular associated smooth muscle cell SubClassOf RO_0002215 some GO_0002001

[github-actions]

Here's a diff of your edit file (unreasoned) (for c9c678c)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

kidney granular cell http://purl.obolibrary.org/obo/CL_0000648

Removed

• kidney granular cell label "kidney granular cell"

• kidney granular cell EquivalentTo secretory cell and (part of some kidney) and (capable of some renin secretion into blood stream)

Added

• kidney granular cell contributor "https://orcid.org/0000-0003-2034-601X"

• kidney granular cell label "juxtaglomerular granular cell"

• kidney granular cell SubClassOf secretory cell

• kidney granular cell SubClassOf renin secreting kidney vascular associated smooth muscle cell

• kidney granular cell SubClassOf part of some kidney

• kidney granular cell SubClassOf capable of some renin secretion into blood stream

renin secreting kidney vascular associated smooth muscle cell http://purl.obolibrary.org/obo/CL_0019004

Added

• Class: renin secreting kidney vascular associated smooth muscle cell

• renin secreting kidney vascular associated smooth muscle cell contributor "https://orcid.org/0000-0003-2034-601X"

• renin secreting kidney vascular associated smooth muscle cell definition "A vascular associated smooth muscle cell that is part of the kidney and is capable of secreting renin."

  • has cross-reference "PMID:35511367"

• renin secreting kidney vascular associated smooth muscle cell description "Some vascular associated smooth muscle cells in the kidney are capable of producing, storing, and secreting renin in response to homeostatic threats to blood pressure or sodium balance. Usually, the juxtaglomerular granular (JG) cells are the only ones that do this, but in some cases, when the demand for renin cannot be met by the JG cells, other vascular associated smooth muscle cells in the kidney are also recruited for renin secretion."

  • has cross-reference "PMID:35511367"

• renin secreting kidney vascular associated smooth muscle cell label "renin secreting kidney vascular associated smooth muscle cell"@en

• renin secreting kidney vascular associated smooth muscle cell SubClassOf vascular associated smooth muscle cell

• renin secreting kidney vascular associated smooth muscle cell SubClassOf part of some kidney

• renin secreting kidney vascular associated smooth muscle cell SubClassOf capable of some renin secretion into blood stream