Test

add methods_include methods_exclude arguments (#100) #378

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Job	Run time
test / List components to test	17s
test / Test (cycombine_no_controls_to_goal, methods, src/methods/cycombine_no_controls_to_goal/config.vs...	2m 51s
test / Test (limma_remove_batch_effect, methods, src/methods/limma_remove_batch_effect/config.vsh.yaml, ...	2m 3s
test / Test (cytonorm_all_controls_to_mid, methods, src/methods/cytonorm_all_controls_to_mid/config.vsh....	2m 19s
test / Test (rpca_to_mid, methods, src/methods/rpca_to_mid/config.vsh.yaml, src/methods/rpca_to_mid/, r_...	4m 10s
test / Test (gaussnorm, methods, src/methods/gaussnorm/config.vsh.yaml, src/methods/gaussnorm/, r_script...	2m 53s
test / Test (cytonorm_all_controls_to_goal, methods, src/methods/cytonorm_all_controls_to_goal/config.vs...	3m 8s
test / Test (batchadjust_all_controls, methods, src/methods/batchadjust_all_controls/config.vsh.yaml, sr...	2m 45s
test / Test (combat, methods, src/methods/combat/config.vsh.yaml, src/methods/combat/, python_script, me...	2m 21s
test / Test (batchadjust_one_control, methods, src/methods/batchadjust_one_control/config.vsh.yaml, src/...	1m 30s
test / Test (harmonypy, methods, src/methods/harmonypy/config.vsh.yaml, src/methods/harmonypy/, python_s...	1m 13s
test / Test (cycombine_one_control_to_mid, methods, src/methods/cycombine_one_control_to_mid/config.vsh....	2m 39s
test / Test (mnn, methods, src/methods/mnn/config.vsh.yaml, src/methods/mnn/, r_script, methods/mnn)	3m 13s
test / Test (cytonorm_one_control_to_goal, methods, src/methods/cytonorm_one_control_to_goal/config.vsh....	4m 10s
test / Test (cycombine_all_controls_to_mid, methods, src/methods/cycombine_all_controls_to_mid/config.vs...	1m 58s
test / Test (cytonorm_one_control_to_mid, methods, src/methods/cytonorm_one_control_to_mid/config.vsh.ya...	3m 34s
test / Test (cycombine_all_controls_to_goal, methods, src/methods/cycombine_all_controls_to_goal/config....	3m 13s
test / Test (rpca_to_goal, methods, src/methods/rpca_to_goal/config.vsh.yaml, src/methods/rpca_to_goal/,...	4m 38s
test / Test (cytonorm_no_controls_to_mid, methods, src/methods/cytonorm_no_controls_to_mid/config.vsh.ya...	3m 40s
test / Test (cycombine_one_control_to_goal, methods, src/methods/cycombine_one_control_to_goal/config.vs...	3m 21s
test / Test (perfect_integration, control_methods, src/control_methods/perfect_integration/config.vsh.ya...	3m 16s
test / Test (cycombine_no_controls_to_mid, methods, src/methods/cycombine_no_controls_to_mid/config.vsh....	3m 2s
test / Test (no_integration, control_methods, src/control_methods/no_integration/config.vsh.yaml, src/co...	2m 43s
test / Test (cytonorm_no_controls_to_goal, methods, src/methods/cytonorm_no_controls_to_goal/config.vsh....	4m 6s
test / Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...	2m 9s
test / Test (emd, metrics, src/metrics/emd/config.vsh.yaml, src/metrics/emd/, python_script, metrics/emd)	2m 7s
test / Test (average_batch_r2, metrics, src/metrics/average_batch_r2/config.vsh.yaml, src/metrics/averag...	3m 3s
test / Test (bras, metrics, src/metrics/bras/config.vsh.yaml, src/metrics/bras/, python_script, metrics/...	3m 23s
test / Test (flowsom_mapping_similarity, metrics, src/metrics/flowsom_mapping_similarity/config.vsh.yaml...	5m 5s
test / Test (cms, metrics, src/metrics/cms/config.vsh.yaml, src/metrics/cms/, r_script, metrics/cms)	8m 46s
	1h 33m 36s

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add methods_include methods_exclude arguments (#100) #378

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add methods_include methods_exclude arguments (#100) #378

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