Test

Setup run hpc #519

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Job	Run time
test / List components to test	37s
test / Test (ratio_inconsistent_peaks, metrics, src/metrics/ratio_inconsistent_peaks/config.vsh.yaml, sr...	2m 12s
test / Test (flowsom_mapping_similarity, metrics, src/metrics/flowsom_mapping_similarity/config.vsh.yaml...	2m 47s
test / Test (lisi, metrics, src/metrics/lisi/config.vsh.yaml, src/metrics/lisi/, python_script, metrics/...	3m 31s
test / Test (average_batch_r2, metrics, src/metrics/average_batch_r2/config.vsh.yaml, src/metrics/averag...	1m 41s
test / Test (emd, metrics, src/metrics/emd/config.vsh.yaml, src/metrics/emd/, python_script, metrics/emd)	1m 35s
test / Test (cycombine_one_control_to_mid, methods, src/methods/cycombine_one_control_to_mid/config.vsh....	2m 19s
test / Test (batchadjust_all_controls, methods, src/methods/batchadjust_all_controls/config.vsh.yaml, sr...	2m 14s
test / Test (batchadjust_one_control, methods, src/methods/batchadjust_one_control/config.vsh.yaml, src/...	2m 48s
test / Test (harmonypy, methods, src/methods/harmonypy/config.vsh.yaml, src/methods/harmonypy/, python_s...	3m 51s
test / Test (rpca_to_goal, methods, src/methods/rpca_to_goal/config.vsh.yaml, src/methods/rpca_to_goal/,...	2m 44s
test / Test (cytonorm_one_control_to_goal, methods, src/methods/cytonorm_one_control_to_goal/config.vsh....	3m 27s
test / Test (shuffle_integration_globally, control_methods, src/control_methods/shuffle_integration_glob...	2m 3s
test / Test (cytonorm_all_controls_to_goal, methods, src/methods/cytonorm_all_controls_to_goal/config.vs...	2m 45s
test / Test (cytonorm_all_controls_to_mid, methods, src/methods/cytonorm_all_controls_to_mid/config.vsh....	3m 48s
test / Test (no_integration, control_methods, src/control_methods/no_integration/config.vsh.yaml, src/co...	2m 28s
test / Test (cycombine_no_controls_to_goal, methods, src/methods/cycombine_no_controls_to_goal/config.vs...	2m 45s
test / Test (cycombine_no_controls_to_mid, methods, src/methods/cycombine_no_controls_to_mid/config.vsh....	3m 6s
test / Test (cytonorm_no_controls_to_goal, methods, src/methods/cytonorm_no_controls_to_goal/config.vsh....	3m 20s
test / Test (cycombine_one_control_to_goal, methods, src/methods/cycombine_one_control_to_goal/config.vs...	2m 53s
test / Test (rpca_to_mid, methods, src/methods/rpca_to_mid/config.vsh.yaml, src/methods/rpca_to_mid/, r_...	3m 29s
test / Test (gaussnorm, methods, src/methods/gaussnorm/config.vsh.yaml, src/methods/gaussnorm/, r_script...	2m 56s
test / Test (shuffle_integration_within_cell_type, control_methods, src/control_methods/shuffle_integrat...	1m 48s
test / Test (cytovi, methods, src/methods/cytovi/config.vsh.yaml, src/methods/cytovi/, python_script, me...	7m 43s
test / Test (cytonorm_one_control_to_mid, methods, src/methods/cytonorm_one_control_to_mid/config.vsh.ya...	3m 8s
test / Test (cytonorm_no_controls_to_mid, methods, src/methods/cytonorm_no_controls_to_mid/config.vsh.ya...	2m 48s
test / Test (limma_remove_batch_effect, methods, src/methods/limma_remove_batch_effect/config.vsh.yaml, ...	3m 3s
test / Test (combat, methods, src/methods/combat/config.vsh.yaml, src/methods/combat/, python_script, me...	2m 39s
test / Test (perfect_integration, control_methods, src/control_methods/perfect_integration/config.vsh.ya...	1m 46s
test / Test (shuffle_integration_within_batch, control_methods, src/control_methods/shuffle_integration_...	1m 20s
	1h 23m 34s

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Setup run hpc #519

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Setup run hpc #519

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