AICONSlab repositories

17 repositories

MIRACL
Public
Multi-modal Image Registration And Connectivity anaLysis
deep-learning neuroscience artificial-intelligence
deep-learning neuroscience artificial-intelligence mri connectivity neuroimaging image-segmentation microscopy brain image-registration
Python
•
Other
•12•49•6•11•Updated Sep 1, 2026Sep 1, 2026
MouseCCI-MRI-LSFM-submission
Public
Jupyter Notebook
•
MIT License
•0•0•0•0•Updated Aug 19, 2026Aug 19, 2026
novas3d
Public
Python
•
GNU General Public License v3.0
•0•2•0•0•Updated Jul 24, 2026Jul 24, 2026
AD_connectome_gradients
Public
Jupyter Notebook
•
Other
•1•3•0•0•Updated May 10, 2026May 10, 2026
segcsvd
Public
CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI
GNU General Public License v3.0
•1•18•0•0•Updated Feb 10, 2026Feb 10, 2026
3DINO
Public
[npj Digital Medicine] A generalizable 3D framework and model for self-supervised learning in medical imaging
Python
•
Other
•16•169•2•0•Updated Nov 7, 2025Nov 7, 2025
SynthSegCSVD
Public
CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI
GNU General Public License v3.0
•0•13•0•0•Updated Mar 28, 2025Mar 28, 2025
VentMapp3r
Public
AICONSlab's ventricular segmentation technique using CNNs
deep-learning cnn python3
deep-learning cnn python3 mri medical-imaging brain-segmentation ventricle
Python
•
GNU General Public License v3.0
•1•11•1•1•Updated Oct 29, 2024Oct 29, 2024
HippMapp3r
Public template
AICONSlab's hippocampal segmentation algorithm using CNNs
deep-learning image-processing neuroscience
deep-learning image-processing neuroscience cnn python3 mri medical-imaging neural-networks neuroimaging image-segmentation
Python
•
GNU General Public License v3.0
•9•31•3•23•Updated Oct 10, 2024Oct 10, 2024
iCVMapp3r
Public
AICONSlab's brain extraction (skull-stripping) algorithm using CNNs
deep-learning image-processing neuroscience
deep-learning image-processing neuroscience cnn python3 mri medical-imaging neuroimaging brain-segmentation
Python
•
GNU General Public License v3.0
•2•18•0•23•Updated Oct 8, 2024Oct 8, 2024
HyperMapp3r
Public
AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs
deep-learning mri medical-imaging
deep-learning mri medical-imaging neuroimaging image-segmentation wmh wmh-segmentation
Python
•
GNU General Public License v3.0
•3•21•3•0•Updated Oct 4, 2024Oct 4, 2024
snf
Public
Adaptation of Similarity Network Fusion (SNF) to Python
Python
•
Apache License 2.0
•0•4•0•0•Updated Aug 24, 2023Aug 24, 2023
isles22_atlas_submission
Public
AICONSLab's submission for the ISLES 22 ATLAS 2.0 challenge.
Python
•
Apache License 2.0
•0•1•0•0•Updated Aug 17, 2022Aug 17, 2022
HyperMapp3r_lite
Public
GNU General Public License v3.0
•0•0•0•0•Updated Jun 24, 2022Jun 24, 2022
roodmri
Public
AICONSlab's DL benchmarking platform to OOD data in MRI
benchmarking deep-learning cnn
benchmarking deep-learning cnn mri neuroimaging out-of-distribution corruptions vision-transformer
Python
•
GNU General Public License v3.0
•2•17•1•0•Updated Mar 23, 2022Mar 23, 2022
MONAI
Public
AI Toolkit for Healthcare Imaging
Python
•
Apache License 2.0
•1.6k•0•0•0•Updated Dec 15, 2021Dec 15, 2021
AI-at-SRI
Public
AI/ML opportunities at Sunnybrook Research Institute
1•2•0•0•Updated Jul 28, 2021Jul 28, 2021

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Artificial Intelligence and Computational NeuroSciences Lab

All

17 repositories

MIRACL

MouseCCI-MRI-LSFM-submission

novas3d

AD_connectome_gradients

segcsvd

3DINO

SynthSegCSVD

VentMapp3r

HippMapp3r

iCVMapp3r

HyperMapp3r

snf

isles22_atlas_submission

HyperMapp3r_lite

roodmri

MONAI

AI-at-SRI

Repositories list

17 repositories