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@GLOMICON Global Omics Observatory Network (GLOMICON)

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    Repositories list

    16 repositories

    • intercomparison

      Public
      A repository for the intercomparison of microbial community observation procedures
      Jupyter Notebook
      •0•1•1•0•Updated Oct 7, 2026Oct 7, 2026

    • asvBiomXchange

      Public
      A repository to develop an exchange format for molecular biodiversity data
      4•1•14•1•Updated Nov 8, 2019Nov 8, 2019

    • qzip

      Public
      rapid meta-barcoding pipeline
      Shell
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Aug 13, 2019Aug 13, 2019

    • qiita

      Public
      Qiita - A multi-omics databasing effort
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •82•0•0•0•Updated May 14, 2019May 14, 2019

    • qiime2

      Public
      Official repository for the QIIME 2 framework.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •254•0•0•0•Updated May 14, 2019May 14, 2019

    • osd-analysis

      Public
      Repository for all Ocean Sampling Day related source code with information on how-to acquire OSD data
      R
      •
      Apache License 2.0
      •8•0•0•0•Updated May 14, 2019May 14, 2019

    • banzai

      Public
      Scripts for analyzing Illumina-generated environmental DNA sequence data.
      Shell
      •6•0•0•0•Updated May 14, 2019May 14, 2019

    • dada2

      Public
      Accurate sample inference from amplicon data with single nucleotide resolution
      R
      •
      GNU Lesser General Public License v3.0
      •174•0•0•0•Updated May 14, 2019May 14, 2019

    • anvio

      Public
      An analysis and visualization platform for 'omics data
      Python
      •
      GNU General Public License v3.0
      •172•0•0•0•Updated May 14, 2019May 14, 2019

    • emp

      Public
      Code repository of the Earth Microbiome Project.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •68•0•0•0•Updated May 14, 2019May 14, 2019

    • tourmaline

      Public
      Amplicon sequence processing workflow using QIIME 2 and Snakemake.
      Python
      •
      Other
      •22•0•0•0•Updated May 14, 2019May 14, 2019

    • q2-dada2

      Public
      QIIME 2 plugin wrapping DADA2
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •42•0•0•0•Updated Apr 24, 2019Apr 24, 2019

    • decontam

      Public
      Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
      R
      •26•0•0•0•Updated Jan 21, 2019Jan 21, 2019

    • omicon

      Public
      An ontology for global omics observation
      Makefile
      •0•1•1•0•Updated Oct 26, 2018Oct 26, 2018

    • about-this-org

      Public
      A documentation repo describing the contents and mission of the GLOMICON org
      0•0•1•0•Updated Oct 26, 2018Oct 26, 2018

    • labelmaker

      Public
      Make printable QR labels for samples.
      TeX
      •8•0•0•0•Updated Oct 18, 2018Oct 18, 2018
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