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    55 repositories

    • uORF_annotator

      Public
      Python
      •0•2•0•0•Updated Feb 12, 2026Feb 12, 2026

    • SICER2

      Public
      Our re-implementation of SICER broad peak calling algorithm
      Python
      •0•4•1•0•Updated Sep 12, 2025Sep 12, 2025

    • pregnancy_meta_analysis

      Public
      Jupyter Notebook
      •0•1•0•0•Updated Mar 21, 2025Mar 21, 2025

    • RMAhunter

      Public
      genomevariant-callingexome
      genomevariant-callingexome
      HTML
      •0•9•0•1•Updated Mar 25, 2024Mar 25, 2024

    • caller_benchmark

      Public
      Companion repository for the human variant calling pipeline comparison paper
      R
      •
      GNU General Public License v3.0
      •2•12•0•0•Updated Feb 21, 2022Feb 21, 2022

    • covid19-exome

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 12, 2022Feb 12, 2022

    • russian_exome_pipeline

      Public
      Description of tools and docker image for the Russian exome pipeline
      Python
      •0•3•0•0•Updated Nov 2, 2021Nov 2, 2021

    • guar_genotypes

      Public
      Repository containing data and code for the guar genotyping project
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated May 5, 2021May 5, 2021

    • ukb_phewas

      Public
      Phenome-wide search for pleiotropic loci
      C++
      •2•3•0•0•Updated Jan 25, 2021Jan 25, 2021

    • Sibelia

      Public
      Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.
      C++
      •
      Other
      •17•70•16•0•Updated Oct 29, 2020Oct 29, 2020

    • weswgs

      Public
      coveragesequencingwhole-exome-sequencing
      coveragesequencingwhole-exome-sequencingwhole-genome-sequencing
      R
      •1•4•0•0•Updated Jul 30, 2020Jul 30, 2020

    • afpaper

      Public
      Scripts and data processing notes for Russian exome sequencing AF paper
      russian-specificwhole-exome-sequencingexome-sequencing
      russian-specificwhole-exome-sequencingexome-sequencingallele-frequencies
      R
      •0•1•0•0•Updated Jul 24, 2020Jul 24, 2020

    • GMA

      Public
      C
      •0•0•0•0•Updated Jun 17, 2019Jun 17, 2019

    • Gematria

      Public
      Fast and easy tool for genome mappability estimation
      Python
      •1•2•0•0•Updated Jun 16, 2019Jun 16, 2019

    • genequery

      Public
      Scripts and pre-processing for GeneQuery database
      R
      •0•0•0•0•Updated Jun 6, 2019Jun 6, 2019

    • EM_ampliseq_analysis

      Public
      Analysis scripts for EM ampliseq manuscript
      R
      •0•0•0•0•Updated Feb 12, 2019Feb 12, 2019

    • diabetes

      Public
      Whole-exome study of obesity and diabetes in Russian population
      R
      •0•1•0•0•Updated Aug 17, 2018Aug 17, 2018

    • myodiff

      Public
      Working scripts and processed data for myodifferentiation paper
      0•0•0•0•Updated Dec 26, 2017Dec 26, 2017

    • rnaseq

      Public
      Shell
      •0•1•0•0•Updated Sep 3, 2017Sep 3, 2017

    • rma

      Public
      RMA paper scripts
      Python
      •0•0•0•0•Updated Jun 22, 2017Jun 22, 2017

    • exome

      Public
      A complete pipeline for cohort-oriented exome processing and annotation.
      Shell
      •1•2•0•0•Updated Sep 8, 2016Sep 8, 2016

    • SBW_scripts

      Public
      Scripts originally taken from Amazon clowd version of SBW-2016 setup.
      Shell
      •0•1•0•0•Updated Jun 4, 2016Jun 4, 2016

    • radish_transcriptome_at

      Public
      R
      •0•0•0•0•Updated Apr 4, 2016Apr 4, 2016

    • microarray

      Public
      Examples of microarray processing R scripts
      0•0•0•0•Updated Apr 2, 2016Apr 2, 2016

    • django_openid_provider

      Public
      Forked from https://bitbucket.org/romke/django_openid_provider
      Python
      •3•0•0•0•Updated Jul 31, 2015Jul 31, 2015

    • proteomics2014

      Public
      Proteomics Homeworks, Fall 2014
      Python
      •2•0•0•0•Updated Feb 2, 2015Feb 2, 2015

    • bi2014-drosophila-melanogaster

      Public
      Python
      •0•0•0•0•Updated Jan 4, 2015Jan 4, 2015

    • bi2014-neurospora-crassa

      Public
      Python
      •0•0•0•0•Updated Dec 13, 2014Dec 13, 2014

    • bi2014-mycoplasma-genitalium

      Public
      Python
      •0•0•10•0•Updated Dec 6, 2014Dec 6, 2014

    • bi2014-coffea-canephora

      Public
      Rust
      •2•0•0•0•Updated Dec 5, 2014Dec 5, 2014
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