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@catniplab CATNIP Laboratory

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    23 repositories

    • xfads

      Public
      large scale variational Gaussian state-space models
      Python
      •
      MIT License
      •2•15•12•1•Updated Sep 3, 2026Sep 3, 2026

    • catniplab.github.io

      Public
      CATNIP Laboratory website
      Jupyter Notebook
      •
      MIT License
      •35k•2•1•0•Updated Aug 8, 2026Aug 8, 2026

    • latent_dynamics_workshop

      Public
      Exercises and examples for the latent dynamics workshop
      Python
      •
      MIT License
      •11•20•0•0•Updated Jul 16, 2026Jul 16, 2026

    • neurofisherSNR

      Public
      Python
      •
      MIT License
      •0•2•0•1•Updated Jul 2, 2026Jul 2, 2026

    • vjf

      Public
      Variational Joint Filtering
      gaussian-processessystem-identificationonline-learning
      gaussian-processessystem-identificationonline-learningvariational-bayesstate-space-modelrbf-networkbayesian-filtering
      Python
      •
      MIT License
      •4•9•0•0•Updated Jun 30, 2026Jun 30, 2026

    • predictability_enables_parallelization

      Public
      Official repo for "Predictability Enables Parallelization of Nonlinear State Space Models" by Gonzalez*, Kozachkov*, et al. Published NeurIPS '25.
      Python
      •
      MIT License
      •2•0•0•0•Updated Apr 19, 2026Apr 19, 2026

    • NeuroTask

      Public
      NeuroTask: A Benchmark Dataset for Multi-Task Neural Analysis
      Jupyter Notebook
      •
      MIT License
      •3•16•0•0•Updated Apr 13, 2025Apr 13, 2025

    • back_to_the_continuous_attractor

      Public
      Official implementation of "Back to the Continuous Attractor" (NeurIPS 2024). This repository contains code for reproducing the experiments, pretrained models, …
      Python
      •1•9•0•0•Updated Jan 21, 2025Jan 21, 2025

    • svmc

      Public
      Streaming Variational Monte Carlo
      Jupyter Notebook
      •
      MIT License
      •0•2•0•0•Updated Nov 2, 2022Nov 2, 2022

    • actx_recurrence

      Public
      Python
      •0•0•0•0•Updated Aug 6, 2022Aug 6, 2022

    • ChoiceProbability

      Public
      Developing estimators written in Julia. ChoiceProbability.jl
      Julia
      •0•0•0•0•Updated Feb 28, 2022Feb 28, 2022

    • vlgp

      Public
      Dimensionality reduction of spikes trains
      dimensionality-reductiongaussian-processesspike-trains
      dimensionality-reductiongaussian-processesspike-trainsvariational-bayes
      Python
      •
      MIT License
      •8•49•0•0•Updated Oct 9, 2021Oct 9, 2021

    • NPGLM

      Public
      non-parametric inference for convolutional filters in poisson glms
      Python
      •
      MIT License
      •1•13•1•0•Updated Sep 20, 2021Sep 20, 2021

    • mmd-glm

      Public
      Python
      •
      MIT License
      •3•1•0•0•Updated Oct 22, 2020Oct 22, 2020

    • ML-music-analysis

      Public
      How do machines learn to predict music?
      Python
      •
      MIT License
      •0•1•0•0•Updated Aug 26, 2020Aug 26, 2020

    • graphic-elements

      Public
      Useful graphic elements for everybody
      Other
      •0•1•0•0•Updated Aug 17, 2020Aug 17, 2020

    • NeurExpo

      Public
      Visualizing neural spike trains and latent processes in real time.
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Jul 20, 2020Jul 20, 2020

    • tree_structured_rslds

      Public
      Tree-structured recurrent switching linear dynamical systems
      Python
      •
      MIT License
      •6•39•0•0•Updated Jul 13, 2020Jul 13, 2020

    • DiffEqBase.jl

      Public
      The lightweight Base library for shared types and functionality.
      Julia
      •
      Other
      •126•0•0•0•Updated Feb 17, 2020Feb 17, 2020

    • nest-simulator

      Public archive
      The NEST simulator
      C++
      •
      GNU General Public License v2.0
      •407•0•0•0•Updated Jan 3, 2020Jan 3, 2020

    • myopiccontrol

      Public
      Jupyter Notebook
      •2•2•0•0•Updated Jan 15, 2019Jan 15, 2019

    • aboDecoding

      Public
      Jupyter Notebook
      •3•3•0•0•Updated Sep 14, 2018Sep 14, 2018

    • crossFrequencyCoupling

      Public
      estimate cross-frequency coupling (aka nested oscillation or phase-amplitude coupling) for neural signals
      MATLAB
      •
      MIT License
      •6•18•3•0•Updated Sep 17, 2016Sep 17, 2016
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