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    97 repositories

    • sprinx

      Public
      Automated secondary structure estimation and Sprinzl coordinate assignment for tRNA sequences
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 10, 2026Sep 10, 2026

    • RmapDifyChatbot

      Public
      Python
      •0•1•0•0•Updated Sep 10, 2026Sep 10, 2026

    • scimodom

      Public
      Sci- ModoM: A quantitative database of transcriptome-wide high-throughput RNA modification sites
      Python
      •
      GNU Affero General Public License v3.0
      •0•3•39•0•Updated Sep 4, 2026Sep 4, 2026

    • gEAR

      Public
      The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •6•1•6•0•Updated Aug 26, 2026Aug 26, 2026

    • QutRNA2

      Public
      Robust tRNA modification discovery from Nanopore direct tRNA sequencing
      Python
      •
      Apache License 2.0
      •2•5•0•0•Updated Aug 13, 2026Aug 13, 2026

    • PPIQuest

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 30, 2026Jul 30, 2026

    • biolm_utils

      Public
      Python
      •1•1•0•0•Updated Jul 22, 2026Jul 22, 2026

    • gear_lamp

      Public
      Ansible Playbook install for the gEAR repository (DHART) and LAMP stack
      Jinja
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Jul 17, 2026Jul 17, 2026

    • LLM-PPI-Extraction

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 17, 2026Jul 17, 2026

    • rp-bp

      Public
      Rp-Bp is a Bayesian approach to predict, at base-pair resolution, ribosome occupancy and translation.
      Python
      •
      MIT License
      •6•7•6•0•Updated Jul 16, 2026Jul 16, 2026

    • pbiotools

      Public
      Bioinformatics utilities
      Python
      •
      MIT License
      •1•0•1•0•Updated Jul 16, 2026Jul 16, 2026

    • LINDA

      Public
      HTML
      •0•1•2•0•Updated Jul 2, 2026Jul 2, 2026

    • flexbar_rs

      Public
      Rust
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 1, 2026Jul 1, 2026

    • medication_information_extraction_using_llms

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jun 19, 2026Jun 19, 2026

    • JACUSA2

      Public
      New version of JACUSA -> 2.0
      Java
      •
      GNU General Public License v3.0
      •2•32•31•2•Updated Jun 2, 2026Jun 2, 2026

    • m6A_psi_interaction

      Public
      Python
      •0•1•1•0•Updated May 19, 2026May 19, 2026

    • CardioGuidelinesGraph

      Public
      Python
      •0•2•6•0•Updated May 13, 2026May 13, 2026

    • rna_saluki_cnn

      Public
      Python
      •0•0•0•0•Updated Apr 30, 2026Apr 30, 2026

    • section_classification_pet

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 14, 2026Apr 14, 2026

    • rust-bio

      Public
      This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tes…
      Rust
      •
      MIT License
      •220•0•0•0•Updated Feb 23, 2026Feb 23, 2026

    • euf-specs

      Public
      Specifications of epitranscriptome unified file formats (bedRMod)
      TeX
      •1•1•2•0•Updated Jan 27, 2026Jan 27, 2026

    • BertGCN

      Public
      Python
      •0•1•0•0•Updated Jan 22, 2026Jan 22, 2026

    • rna_protein_xlnet

      Public
      Python
      •0•0•0•0•Updated Jan 22, 2026Jan 22, 2026

    • stackit_cost_monitoring

      Public
      Python
      •
      GNU General Public License v3.0
      •1•0•0•1•Updated Jan 19, 2026Jan 19, 2026

    • check_ldap_ppolicy_lockout

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • LLM_Relations

      Public
      Python
      •0•2•0•0•Updated Nov 7, 2025Nov 7, 2025

    • prRONTo

      Public
      R
      •0•0•1•0•Updated Oct 20, 2025Oct 20, 2025

    • SurrogatorEval

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 8, 2025Oct 8, 2025

    • sodar-server

      Public
      SODAR: System for Omics Data Access and Retrieval
      Python
      •
      MIT License
      •4•0•0•0•Updated Sep 19, 2025Sep 19, 2025

    • QutRNA

      Public
      R
      •
      MIT License
      •1•3•1•0•Updated Sep 19, 2025Sep 19, 2025
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