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@liulabspatial LiuLabSpatial@Janelia

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    6 repositories

    • Omics-cycleHCR-QuAC

      Public
      Analysis pipelines for paper Machine learning-guided spatial omics for tissue-scale discovery of cell-type-specific architectures
      machine-learningcomputer-visiondeep-learning
      machine-learningcomputer-visiondeep-learningimage-processingspatial-analysisimage-analysissingle-cellmicroscopyspatial-proteomicscell-segmentation
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•0•Updated Sep 29, 2026Sep 29, 2026

    • CycleHCR-Pipeline

      Public
      Python
      •
      Other
      •0•1•0•0•Updated Dec 19, 2025Dec 19, 2025

    • nf-nd2stitcher

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Dec 15, 2024Dec 15, 2024

    • cycleHCR

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•5•1•0•Updated May 1, 2024May 1, 2024

    • liulabspatial

      Public
      Config files for my GitHub profile.
      configgithub-config
      configgithub-config
      0•0•0•0•Updated Apr 8, 2024Apr 8, 2024

    • nf-rsfish

      Public
      Nextflow wrapper for RS-FISH-Spark
      Nextflow
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Feb 27, 2024Feb 27, 2024
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