Update documentation

Author: masato1122

_sources/usage.rst.txt

@@ -1,16 +1,16 @@
 Examples
 =========
 
-1. Examples for required packages
-----------------------------------
+Examples for required packages
+-------------------------------
 
 Example jobs are available in the ``auto-kappa/examples`` directory 
 for ``alm`` (``examples/1_alm``), ``anphon`` (``examples/2_anphon``),
 ASE (``examples/3_ase``), and Custodian (``examples/4_custodian``).
 Please go to each directory and run the jobs.
 
-2. ``auto-kappa`` example
----------------------------
+auto-kappa example
+--------------------
 
 The ``.../examples/5_single`` directory contains an example to compute thermal conductivity of Silicon using auto-kappa.
 An example job script is shown below. 

index.html

@@ -96,8 +96,8 @@ <h1>auto-kappa<a class="headerlink" href="#auto-kappa" title="Link to this headi
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="usage.html">2. Examples</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="usage.html#examples-for-required-packages">2.1. 1. Examples for required packages</a></li>
-<li class="toctree-l2"><a class="reference internal" href="usage.html#auto-kappa-example">2.2. 2. <code class="docutils literal notranslate"><span class="pre">auto-kappa</span></code> example</a></li>
+<li class="toctree-l2"><a class="reference internal" href="usage.html#examples-for-required-packages">2.1. Examples for required packages</a></li>
+<li class="toctree-l2"><a class="reference internal" href="usage.html#auto-kappa-example">2.2. auto-kappa example</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="params_ak.html">3. Parameters for auto-kappa</a><ul>

searchindex.js

@@ -56,8 +56,8 @@
               <ul class="current">
 <li class="toctree-l1"><a class="reference internal" href="installation.html">1. Installation</a></li>
 <li class="toctree-l1 current"><a class="current reference internal" href="#">2. Examples</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="#examples-for-required-packages">2.1. 1. Examples for required packages</a></li>
-<li class="toctree-l2"><a class="reference internal" href="#auto-kappa-example">2.2. 2. <code class="docutils literal notranslate"><span class="pre">auto-kappa</span></code> example</a></li>
+<li class="toctree-l2"><a class="reference internal" href="#examples-for-required-packages">2.1. Examples for required packages</a></li>
+<li class="toctree-l2"><a class="reference internal" href="#auto-kappa-example">2.2. auto-kappa example</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="params_ak.html">3. Parameters for auto-kappa</a></li>
@@ -93,14 +93,14 @@
   <section id="examples">
 <h1><span class="section-number">2. </span>Examples<a class="headerlink" href="#examples" title="Link to this heading"></a></h1>
 <section id="examples-for-required-packages">
-<h2><span class="section-number">2.1. </span>1. Examples for required packages<a class="headerlink" href="#examples-for-required-packages" title="Link to this heading"></a></h2>
+<h2><span class="section-number">2.1. </span>Examples for required packages<a class="headerlink" href="#examples-for-required-packages" title="Link to this heading"></a></h2>
 <p>Example jobs are available in the <code class="docutils literal notranslate"><span class="pre">auto-kappa/examples</span></code> directory
 for <code class="docutils literal notranslate"><span class="pre">alm</span></code> (<code class="docutils literal notranslate"><span class="pre">examples/1_alm</span></code>), <code class="docutils literal notranslate"><span class="pre">anphon</span></code> (<code class="docutils literal notranslate"><span class="pre">examples/2_anphon</span></code>),
 ASE (<code class="docutils literal notranslate"><span class="pre">examples/3_ase</span></code>), and Custodian (<code class="docutils literal notranslate"><span class="pre">examples/4_custodian</span></code>).
 Please go to each directory and run the jobs.</p>
 </section>
 <section id="auto-kappa-example">
-<h2><span class="section-number">2.2. </span>2. <code class="docutils literal notranslate"><span class="pre">auto-kappa</span></code> example<a class="headerlink" href="#auto-kappa-example" title="Link to this heading"></a></h2>
+<h2><span class="section-number">2.2. </span>auto-kappa example<a class="headerlink" href="#auto-kappa-example" title="Link to this heading"></a></h2>
 <p>The <code class="docutils literal notranslate"><span class="pre">.../examples/5_single</span></code> directory contains an example to compute thermal conductivity of Silicon using auto-kappa.
 An example job script is shown below.
 Since all processes are included in this job, it takes about half an hour to complete.