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‎.github/workflows/build.yaml‎

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name: Build, Test and Release Platforma Block
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on:
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merge_group:
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pull_request:
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types: [opened, reopened, synchronize]
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branches:
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- 'main'
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push:
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branches:
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- 'main'
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workflow_dispatch: {}
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jobs:
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init:
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if: github.repository != 'milaboratory/platforma-hello-world'
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runs-on: ubuntu-latest
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steps:
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- uses: milaboratory/github-ci/actions/context/init@v4
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with:
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version-canonize: false
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branch-versioning: main
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run:
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if: github.repository != 'milaboratory/platforma-hello-world'
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needs:
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- init
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uses: milaboratory/github-ci/.github/workflows/node-simple-pnpm.yaml@v4
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with:
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app-name: 'Block: hello-world'
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app-name-slug: 'block-hello-world'
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node-version: '20.x'
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build-script-name: 'build'
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pnpm-recursive-build: false
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test: false
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test-script-name: 'test'
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pnpm-recursive-tests: false
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team-id: 'ciplopen'
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package-path: 'block'
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publish-to-public: true
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create-tag: true
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npmrc-config: |
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{
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"registries": {
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"https://registry.npmjs.org/": {
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"scopes": ["milaboratories", "platforma-open", "platforma-sdk"],
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"tokenVar": "NPMJS_TOKEN"
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},
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"https://npm.pkg.github.com/": {
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"scopes": ["milaboratory"],
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"tokenVar": "NODE_AUTH_TOKEN"
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}
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}
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}
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secrets:
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env: |
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{ "PL_LICENSE": ${{ toJSON(secrets.MI_LICENSE) }},
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"MI_LICENSE": ${{ toJSON(secrets.MI_LICENSE) }},
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"NPMJS_TOKEN": ${{ toJSON(secrets.NPMJS_TOKEN) }},
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"PL_CI_TEST_USER": ${{ toJSON(secrets.PL_CI_TEST_USER) }},
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"PL_CI_TEST_PASSWORD": ${{ toJSON(secrets.PL_CI_TEST_PASSWORD) }},
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"AWS_CI_IAM_MONOREPO_SIMPLE_ROLE": ${{ toJSON(secrets.AWS_CI_IAM_MONOREPO_SIMPLE_ROLE) }},
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"AWS_CI_TURBOREPO_S3_BUCKET": ${{ toJSON(secrets.AWS_CI_TURBOREPO_S3_BUCKET) }},
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"PL_REGISTRY_PLATFORMA_OPEN_UPLOAD_URL": ${{ toJSON(secrets.PL_REGISTRY_PLOPEN_UPLOAD_URL) }},
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"QUAY_USERNAME": ${{ toJSON(secrets.QUAY_USERNAME) }},
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"QUAY_ROBOT_TOKEN": ${{ toJSON(secrets.QUAY_ROBOT_TOKEN) }} }
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SLACK_BOT_TOKEN: ${{ secrets.SLACK_BOT_TOKEN }}
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SLACK_CHANNEL: ${{ secrets.SLACK_BLOCKS_CI_CHANNEL }}
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GH_ZEN_APP_ID: ${{ secrets.GH_ZEN_APP_ID }}
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GH_ZEN_APP_PRIVATE_KEY: ${{ secrets.GH_ZEN_APP_PRIVATE_KEY }}

‎.github/workflows/mark-stable.yaml‎

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name: Mark Platforma Block as Stable
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on:
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workflow_dispatch: {}
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jobs:
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init:
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if: github.repository != 'milaboratory/platforma-hello-world'
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runs-on: ubuntu-latest
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steps:
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- uses: milaboratory/github-ci/actions/context/init@v4
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with:
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version-canonize: false
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branch-versioning: main
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run:
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if: github.repository != 'milaboratory/platforma-hello-world'
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needs:
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- init
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uses: milaboratory/github-ci/.github/workflows/block-mark-stable.yaml@v4
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with:
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app-name: 'Block: hello-world - Mark Stable'
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node-version: '20.x'
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npmrc-config: |
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{
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"registries": {
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"https://registry.npmjs.org/": {
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"scopes": ["milaboratories", "platforma-sdk", "platforma-open"],
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"tokenVar": "NPMJS_TOKEN"
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}
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}
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}
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secrets:
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env: |
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{ "NPMJS_TOKEN": ${{ toJSON(secrets.NPMJS_TOKEN) }},
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"AWS_CI_IAM_MONOREPO_SIMPLE_ROLE": ${{ toJSON(secrets.AWS_CI_IAM_MONOREPO_SIMPLE_ROLE) }} }
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SLACK_BOT_TOKEN: ${{ secrets.SLACK_BOT_TOKEN }}
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SLACK_CHANNEL: ${{ secrets.SLACK_BLOCKS_CI_CHANNEL }}

‎.gitignore‎

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.test_auth.json
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node_modules/
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dist/
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block-pack/
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dev/
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work/
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log/
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.turbo
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vite.config.*.timestamp-*
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software/**/*.tgz
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.DS_Store
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.vscode/sftp.json
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test-dry-run.json

‎.prettierrc‎

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{
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"semi": true,
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"tabWidth": 2,
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"trailingComma": "none",
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"singleQuote": true,
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"printWidth": 100
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}

‎.vscode/extensions.json‎

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{
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"recommendations": [
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"dbaeumer.vscode-eslint",
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"oxc.oxc-vscode"
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]
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}

‎.vscode/settings.json‎

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{
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"vitest.disableWorkspaceWarning": true,
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"[typescript]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[vue]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"cSpell.words": [
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"datasource",
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"pframe",
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"prerun"
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],
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"editor.codeActionsOnSave": {
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"source.fixAll.eslint": "always"
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},
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"eslint.enable": true,
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"eslint.format.enable": true,
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"[javascript]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[css]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[scss]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[html]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[yaml]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[markdown]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"[json]": {
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"editor.defaultFormatter": "oxc.oxc-vscode",
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"editor.tabSize": 2
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},
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"typescript.tsdk": "./node_modules/typescript/lib"
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}

‎CHANGELOG.md‎

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## 1.0.0
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Initial release.

‎README.md‎

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# 3D-Structure-Based-Liabilities
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Identifying potential liabilities in
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therapeutic antibody candidates using 3D structure analysis. Takes a protein
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structure in PDB format through preprocessing and liability detection to flag
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developability risks such as hydrophobic patches, charge patches,
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aggregation-prone regions, deamidation/oxidation hotspots, unpaired cysteines,
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and unwanted glycosylation sites in CDRs.

‎block/package.json‎

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{
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"name": "@platforma-open/milabs.hello-world",
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"version": "1.0.0",
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"scripts": {
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"build": "shx rm -rf ./block-pack && block-tools pack",
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"mark-stable": "block-tools mark-stable -r 's3://milab-euce1-prod-pkgs-s3-block-registry/pub/releases/?region=eu-central-1'",
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"prepublishOnly": "block-tools pack && block-tools publish -r 's3://milab-euce1-prod-pkgs-s3-block-registry/pub/releases/?region=eu-central-1'",
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"do-pack": "shx rm -f *.tgz && block-tools pack && pnpm pack && shx mv *.tgz package.tgz"
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},
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"files": [
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"index.d.ts",
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"index.js"
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],
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"dependencies": {
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"@platforma-sdk/model": "catalog:",
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"@platforma-open/milabs.hello-world.workflow": "workspace:*",
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"@platforma-open/milabs.hello-world.model": "workspace:*",
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"@platforma-open/milabs.hello-world.ui": "workspace:*"
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},
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"block": {
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"components": {
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"workflow": "@platforma-open/milabs.hello-world.workflow/dist/tengo/tpl/main.plj.gz",
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"model": "@platforma-open/milabs.hello-world.model/dist/model.json",
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"ui": "@platforma-open/milabs.hello-world.ui/dist"
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},
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"meta": {
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"title": "Block Title",
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"logo": "file:../logos/block-logo.png",
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"url": "https://github.com/platforma-open/milabs.hello-world",
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"support": "mailto:support@milaboratories.com",
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"description": "Simple Hello World block that can be used as a boilerplate for newly created blocks.",
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"longDescription": "file:../docs/description.md",
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"changelog": "file:../CHANGELOG.md",
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"tags": ["tutorial"],
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"organization": {
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"name": "MiLaboratories Inc",
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"url": "https://milaboratories.com/",
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"logo": "file:../logos/organization-logo.png"
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}
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}
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},
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"devDependencies": {
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"@platforma-sdk/block-tools": "catalog:"
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},
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"packageManager": "pnpm@9.12.0"
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}

‎docs/description.md‎

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# Overview
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Long block description goes here.
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