Skip to content

Commit d4f6feb

Browse files
committed
Updated Repo Info
1 parent 6528c90 commit d4f6feb

4 files changed

Lines changed: 53 additions & 21 deletions

File tree

‎static/json/bokulich-lab/RESCRIPt.json‎

Lines changed: 48 additions & 16 deletions
Original file line numberDiff line numberDiff line change
@@ -278,11 +278,11 @@
278278
"children": [
279279
{
280280
"type": "link",
281-
"url": "https://forum.qiime2.org/t/using-rescript-to-compile-an-sequence-databases-and-taxonomy-classifiers-from-ncbi-genbank/15947",
281+
"url": "https://forum.qiime2.org/t/rescript-evaluate/34265",
282282
"children": [
283283
{
284284
"type": "text",
285-
"value": "Getting sequences and taxonomy with get-ncbi-data"
285+
"value": "RESCRIPt-evaluate"
286286
}
287287
]
288288
}
@@ -294,11 +294,11 @@
294294
"children": [
295295
{
296296
"type": "link",
297-
"url": "https://forum.qiime2.org/t/building-a-coi-database-from-bold-references/16129",
297+
"url": "https://forum.qiime2.org/t/using-rescripts-extract-seq-segments-to-extract-reference-sequences-without-pcr-primer-pairs/23618",
298298
"children": [
299299
{
300300
"type": "text",
301-
"value": "Building a COI database with BOLD sequences"
301+
"value": "Using RESCRIPt’s ‘extract-seq-segments’ to extract reference sequences without PCR primer pairs"
302302
}
303303
]
304304
}
@@ -310,11 +310,11 @@
310310
"children": [
311311
{
312312
"type": "link",
313-
"url": "https://forum.qiime2.org/t/building-a-coi-database-from-ncbi-references/16500",
313+
"url": "https://forum.qiime2.org/t/train-a-taxonomy-classifier-by-extracting-an-amplicon-region-from-a-curated-sequence-alignment-using-silva-as-an-example/34289",
314314
"children": [
315315
{
316316
"type": "text",
317-
"value": "Building a COI database with NCBI sequences"
317+
"value": "Train a taxonomy classifier by extracting an amplicon region from a curated sequence alignment (using SILVA as an example)."
318318
}
319319
]
320320
}
@@ -326,11 +326,11 @@
326326
"children": [
327327
{
328328
"type": "link",
329-
"url": "https://forum.qiime2.org/t/using-rescripts-extract-seq-segments-to-extract-reference-sequences-without-pcr-primer-pairs/23618",
329+
"url": "https://forum.qiime2.org/t/importing-sequence-data-with-lower-case-nucleotide-characters-constructing-an-rdp-classifier-as-an-example/25158",
330330
"children": [
331331
{
332332
"type": "text",
333-
"value": "Using RESCRIPt’s ‘extract-seq-segments’ to extract reference sequences without PCR primer pairs"
333+
"value": "Constructing an RDP classifier"
334334
}
335335
]
336336
}
@@ -342,11 +342,11 @@
342342
"children": [
343343
{
344344
"type": "link",
345-
"url": "https://forum.qiime2.org/t/how-to-train-a-gtdb-ssu-classifier-using-rescript/25725",
345+
"url": "https://forum.qiime2.org/t/how-to-train-a-unite-classifier-using-rescript/28285",
346346
"children": [
347347
{
348348
"type": "text",
349-
"value": "How to train a GTDB SSU classifier using RESCRIPt"
349+
"value": "How to train a UNITE classifier using RESCRIPt"
350350
}
351351
]
352352
}
@@ -358,11 +358,11 @@
358358
"children": [
359359
{
360360
"type": "link",
361-
"url": "https://forum.qiime2.org/t/importing-sequence-data-with-lower-case-nucleotide-characters-constructing-an-rdp-classifier-as-an-example/25158",
361+
"url": "https://forum.qiime2.org/t/using-rescript-to-compile-an-sequence-databases-and-taxonomy-classifiers-from-ncbi-genbank/15947",
362362
"children": [
363363
{
364364
"type": "text",
365-
"value": "Constructing an RDP classifier"
365+
"value": "Getting sequences and taxonomy with get-ncbi-data"
366366
}
367367
]
368368
}
@@ -374,11 +374,43 @@
374374
"children": [
375375
{
376376
"type": "link",
377-
"url": "https://forum.qiime2.org/t/how-to-train-a-unite-classifier-using-rescript/28285",
377+
"url": "https://forum.qiime2.org/t/building-a-coi-database-from-bold-references/16129",
378378
"children": [
379379
{
380380
"type": "text",
381-
"value": "How to train a UNITE classifier using RESCRIPt"
381+
"value": "Building a COI database with BOLD sequences"
382+
}
383+
]
384+
}
385+
]
386+
},
387+
{
388+
"type": "listItem",
389+
"spread": true,
390+
"children": [
391+
{
392+
"type": "link",
393+
"url": "https://forum.qiime2.org/t/building-a-coi-database-from-ncbi-references/16500",
394+
"children": [
395+
{
396+
"type": "text",
397+
"value": "Building a COI database with NCBI sequences"
398+
}
399+
]
400+
}
401+
]
402+
},
403+
{
404+
"type": "listItem",
405+
"spread": true,
406+
"children": [
407+
{
408+
"type": "link",
409+
"url": "https://forum.qiime2.org/t/how-to-train-a-gtdb-ssu-classifier-using-rescript/25725",
410+
"children": [
411+
{
412+
"type": "text",
413+
"value": "How to train a GTDB SSU classifier using RESCRIPt"
382414
}
383415
]
384416
}
@@ -3149,8 +3181,8 @@
31493181
"description": "REference Sequence annotation and CuRatIon Pipeline",
31503182
"branch": "master",
31513183
"last_commit": {
3152-
"sha": "09f3a3e1c191562169ea1708d54436a22ec99cbf",
3184+
"sha": "af29a4f03330f539b30e5a9497e60a412ede5e4b",
31533185
"status": "passed",
3154-
"date": "2026-09-23T15:07:02Z"
3186+
"date": "2026-09-23T22:46:51Z"
31553187
}
31563188
}

‎static/json/distros.json‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -121,9 +121,9 @@
121121
"description": "REference Sequence annotation and CuRatIon Pipeline",
122122
"branch": "master",
123123
"last_commit": {
124-
"sha": "09f3a3e1c191562169ea1708d54436a22ec99cbf",
124+
"sha": "af29a4f03330f539b30e5a9497e60a412ede5e4b",
125125
"status": "passed",
126-
"date": "2026-09-23T15:07:02Z"
126+
"date": "2026-09-23T22:46:51Z"
127127
}
128128
},
129129
{

‎static/json/index.json‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -350,5 +350,5 @@
350350
"timestamp": 1650549351
351351
}
352352
],
353-
"last_updated": "2026-09-23T16:31:36.627Z"
353+
"last_updated": "2026-09-24T16:51:40.161Z"
354354
}

‎static/json/plugins.json‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -121,9 +121,9 @@
121121
"description": "REference Sequence annotation and CuRatIon Pipeline",
122122
"branch": "master",
123123
"last_commit": {
124-
"sha": "09f3a3e1c191562169ea1708d54436a22ec99cbf",
124+
"sha": "af29a4f03330f539b30e5a9497e60a412ede5e4b",
125125
"status": "passed",
126-
"date": "2026-09-23T15:07:02Z"
126+
"date": "2026-09-23T22:46:51Z"
127127
}
128128
},
129129
{

0 commit comments

Comments
 (0)