Issues

• invalid filepath in Collection sometimes results in incorrect error message

  rachis-org/rachis-cli#410 · Filter by author gregcaporaso opened on Sep 2, 2026
  8

  

• q2cli may select an unwritable shared cache directory in centrally-installed Conda environments

  rachis-org/rachis-cli#402 · Filter by author zhuofeih opened on Jun 25, 2026

• top-level rachis command

  rachis-org/rachis-cli#395 · Filter by author gregcaporaso opened on Apr 23, 2026

• q2-feature-tables usage examples render many quotes

  rachis-org/rachis-cli#372 · Filter by author cherman2 opened on Aug 7, 2025
  2

  

• improve error message from qiime tools replay-proveance on invalid input file path

  rachis-org/rachis-cli#321 · Filter by author gregcaporaso opened on Oct 10, 2023
  2

• Alternative boolean representation

  rachis-org/rachis-cli#257 · Filter by author thermokarst opened on Apr 13, 2021
  1

• report some additional information on export of artifacts

  rachis-org/rachis-cli#249 · Filter by author gregcaporaso opened on Aug 18, 2020
  1

• Expose --examples flag at the plugin level

  rachis-org/rachis-cli#245 · Filter by author thermokarst opened on Jun 24, 2020

• --p-exclude-ids description is not clear, request clarification in manual

  rachis-org/rachis-cli#248 · Filter by author mestaki opened on Feb 6, 2020
  1

• Running multiple qiimes concurrently before refreshing the cache causes fireworks

  rachis-org/rachis-cli#186 · Filter by author BenKaehler opened on Apr 26, 2018
  6

• Casing in parameters is mangled resulting in KeyError

  type:bug
  rachis-org/rachis-cli#181 · Filter by author ebolyen opened on Mar 16, 2018

• qiime tools import: show which formats are supported by a type

  enhancement
  rachis-org/rachis-cli#172 · Filter by author jairideout opened on Dec 28, 2017
  

• tab completion breaks on multi-word parameters

  type:bug
  rachis-org/rachis-cli#89 · Filter by author gregcaporaso opened on Oct 21, 2016