ruff Check

Workflow runs for ruff Check

• Bump certifi from 2026.4.22 to 2026.10.18

  completed successfully:
  ruff Check#165:Pull request#130openedbydependabot[bot]Bot
  dependabot/pip/certifi-2026.10.18

  Oct 30, 202610s
  More actions for workflow run 165

• leaf_refs.csv: modifications column (deltasignal specs/107 amendment 1)

  completed successfully:
  ruff Check#164:Pull request#129openedbyadamjohnwright
  leaf-mods-107

  Oct 26, 202611s
  More actions for workflow run 164

• leaf_refs.csv: leaf -> reference entity (deltasignal specs/107)

  completed successfully:
  ruff Check#163:Pull request#128openedbyadamjohnwright
  leaf-refs-107

  Oct 25, 202612s
  More actions for workflow run 163

• Summation regulations as a curation supplement (LNG_SUMMATION_REGULATIONS, deltasignal specs/102)

  completed successfully:
  ruff Check#162:Pull request#127openedbyadamjohnwright
  summation-regulations-102

  Oct 25, 202614s
  More actions for workflow run 162

• Balanced variant choices (LNG_BALANCE_CHOICES, deltasignal specs/101)

  completed successfully:
  ruff Check#161:Pull request#126openedbyadamjohnwright
  balance-choices-101

  Oct 24, 202611s
  More actions for workflow run 161

• rnas.csv: list RNA species per network (deltasignal specs/100)

  completed successfully:
  ruff Check#160:Pull request#125openedbyadamjohnwright
  rna-table-100

  Oct 24, 202613s
  More actions for workflow run 160

• Bump virtualenv from 21.7.13 to 21.14.13

  completed successfully:
  ruff Check#159:Pull request#124openedbydependabot[bot]Bot
  dependabot/pip/virtualenv-21.14.13

  Oct 24, 202614s
  More actions for workflow run 159

• Review 2026-10-22: pool claims, forward intermediates, mutual specialization pairs, provenance, tests

  completed successfully:
  ruff Check#158:Pull request#123openedbyadamjohnwright
  review-2026-10-22

  Oct 23, 202614s
  More actions for workflow run 158

• LNG_UB_LIGASE_UNIT: a ubiquitination does not deplete its own ligase (deltasignal specs/089), default on

  completed successfully:
  ruff Check#157:Pull request#122openedbyadamjohnwright
  ub-ligase-unit-089

  Oct 22, 202614s
  More actions for workflow run 157

• LNG_RELEASE_POOLS (default off): release pools for deltasignal specs/086

  completed successfully:
  ruff Check#156:Pull request#121synchronizebyadamjohnwright
  release-pools-086

  Oct 21, 202614s
  More actions for workflow run 156

• LNG_RELEASE_POOLS (default off): release pools for deltasignal specs/086

  completed successfully:
  ruff Check#155:Pull request#121synchronizebyadamjohnwright
  release-pools-086

  Oct 21, 202613s
  More actions for workflow run 155

• LNG_RELEASE_POOLS (default off): release pools for deltasignal specs/086

  completed successfully:
  ruff Check#154:Pull request#121openedbyadamjohnwright
  release-pools-086

  Oct 21, 202614s
  More actions for workflow run 154

• LNG_DIAGRAM_SUBPATHWAYS: read sub-pathway diagrams for drawn hand-offs (default off)

  completed successfully:
  ruff Check#153:Pull request#119synchronizebyadamjohnwright
  diagram-subpathways

  Oct 21, 202612s
  More actions for workflow run 153

• LNG_RECYCLE_POOLS (default off): recycle pools for deltasignal specs/081

  completed successfully:
  ruff Check#152:Pull request#120synchronizebyadamjohnwright
  recycle-pools-081

  Oct 20, 202615s
  More actions for workflow run 152

• LNG_RECYCLE_POOLS (default off): recycle pools for deltasignal specs/081

  completed successfully:
  ruff Check#151:Pull request#120synchronizebyadamjohnwright
  recycle-pools-081

  Oct 20, 202611s
  More actions for workflow run 151

• LNG_RECYCLE_POOLS (default off): recycle pools for deltasignal specs/081

  completed successfully:
  ruff Check#150:Pull request#120openedbyadamjohnwright
  recycle-pools-081

  Oct 20, 202611s
  More actions for workflow run 150

• LNG_DIAGRAM_SUBPATHWAYS: read sub-pathway diagrams for drawn hand-offs (default off)

  completed successfully:
  ruff Check#149:Pull request#119openedbyadamjohnwright
  diagram-subpathways

  Oct 18, 20269s
  More actions for workflow run 149

• LNG_SPECIALIZATION_CLOSED=twin (default): a specialization bridge does not open a carrier loop (deltasignal specs/068)

  completed successfully:
  ruff Check#148:Pull request#118synchronizebyadamjohnwright
  specialization-closed

  Oct 17, 202611s
  More actions for workflow run 148

• LNG_SPECIALIZATION_CLOSED=twin (default): a specialization bridge does not open a carrier loop (deltasignal specs/068)

  completed successfully:
  ruff Check#147:Pull request#118openedbyadamjohnwright
  specialization-closed

  Oct 17, 202613s
  More actions for workflow run 147

• Specialization bridges (deltasignal specs/067), default add

  completed successfully:
  ruff Check#146:Pull request#117synchronizebyadamjohnwright
  specialization-bridges

  Oct 17, 202611s
  More actions for workflow run 146

• Specialization bridges (deltasignal specs/067), default add

  completed successfully:
  ruff Check#145:Pull request#117synchronizebyadamjohnwright
  specialization-bridges

  Oct 17, 20269s
  More actions for workflow run 145

• Specialization bridges (deltasignal specs/067), default add

  completed successfully:
  ruff Check#144:Pull request#117openedbyadamjohnwright
  specialization-bridges

  Oct 17, 202610s
  More actions for workflow run 144

• Clear every derived structure cache per pathway (deltasignal specs/065 amendment 1)

  completed successfully:
  ruff Check#143:Pull request#116openedbyadamjohnwright
  derived-caches-per-pathway

  Oct 16, 202612s
  More actions for workflow run 143

• Clear the set-member signature cache per pathway (deltasignal specs/065)

  completed successfully:
  ruff Check#142:Pull request#115openedbyadamjohnwright
  sig-cache-per-pathway

  Oct 16, 202610s
  More actions for workflow run 142

• Variant emission: no duplicate copies from an output with a bound and a shared slot

  completed successfully:
  ruff Check#141:Pull request#114synchronizebyadamjohnwright
  fix-variant-duplicate-choices

  Oct 16, 202610s
  More actions for workflow run 141