fix: links in docs

Author: krab1k

README.md

@@ -1,9 +1,9 @@
 # ChargeFW2
 
 Application for computing partial atomic charges using selected empirical methods.
-ChargeFW2 is the computational core of [Atomic Charge Calculator](https://acc2.ncbr.muni.cz).
+ChargeFW2 is the computational core of [Atomic Charge Calculator](https://acc.biodata.ceitec.cz).
 
-See the [short description](https://acc2.ncbr.muni.cz/static/assets/methods.pdf) of implemented methods. 
+See the [short description](https://acc.biodata.ceitec.cz/methods.pdf) of implemented methods.
 
 ## Compilation requirements
 

doc/ChargeFW2 - tutorial.ipynb

@@ -11,7 +11,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "This tutorial shows how to use the Python bindings to the ChargeFW2 application, the computation core of Atomic Charge Calculator II (https://acc2.ncbr.muni.cz/)."
+    "This tutorial shows how to use the Python bindings to the ChargeFW2 application, the computation core of Atomic Charge Calculator II (https://acc.biodata.ceitec.cz/)."
    ]
   },
   {
@@ -25,7 +25,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "The ChargeFW2 is a C++ application which must be compiled and installed first. See the README: https://github.com/krab1k/ChargeFW2"
+    "The ChargeFW2 is a C++ application which must be compiled and installed first. See the README: https://github.com/sb-ncbr/ChargeFW2"
    ]
   },
   {
@@ -236,7 +236,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "All methods are described in the documentation: https://acc2.ncbr.muni.cz/static/assets/methods.pdf"
+    "All methods are described in the documentation: https://acc.biodata.ceitec.cz/methods.pdf"
    ]
   },
   {
@@ -589,7 +589,7 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python 3 (ipykernel)",
    "language": "python",
    "name": "python3"
   },
@@ -603,7 +603,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.12.3"
+   "version": "3.14.3"
   }
  },
  "nbformat": 4,