brain_data_standards_ontologies/bdscratch-simple.obo at master · shawntanzk/brain_data_standards_ontologies · GitHub

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format-version: 1.2
data-version: bdscratch/releases/2020-12-14/bdscratch-simple.owl
subsetdef: ro-eco ""
ontology: bdscratch/bdscratch-simple
property_value: http://purl.org/dc/elements/1.1/description "None" xsd:string
property_value: http://purl.org/dc/elements/1.1/title "Brain Data Standards Cell Ontology" xsd:string
property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/unspecified
property_value: owl:versionInfo "2020-12-14" xsd:string

[Typedef]
id: RO:0002100
name: has soma location
def: "Relation between a neuron and an anatomical structure that its soma is part of." []
property_value: IAO:0000114 IAO:0000125
property_value: IAO:0000117 "David Osumi-Sutherland" xsd:string
property_value: RO:0001900 RO:0001901
expand_expression_to: "BFO_0000051 some (\n   GO_0043025 and   BFO_0000050 some ?Y)" []

[Typedef]
id: RO:0002215
name: capable of
def: "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. " []
subset: ro-eco
property_value: IAO:0000112 "mechanosensory neuron capable of detection of mechanical stimulus involved in sensory perception (GO:0050974)" xsd:string
property_value: IAO:0000112 "osteoclast SubClassOf 'capable of' some 'bone resorption'" xsd:string
property_value: IAO:0000117 "Chris Mungall" xsd:string
property_value: IAO:0000118 "has function realized in" xsd:string
property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/20123131
property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/21208450
property_value: IAO:0000232 "For compatibility with BFO, this relation has a shortcut definition in which the expression \"capable of some P\" expands to \"bearer_of (some realized_by only P)\"." xsd:string
holds_over_chain: has_exemplar RO:0002215
holds_over_chain: subcluster_of RO:0002215
expand_expression_to: "RO_0000053 some (RO_0000054 only ?Y)" []

[Typedef]
id: RO:0002292
name: expresses
def: "Inverse of 'expressed in'" []
property_value: IAO:0000114 IAO:0000125
property_value: IAO:0000117 "Chris Mungall" xsd:string

[Typedef]
id: has_exemplar
name: has_exemplar
transitive_over: subcluster_of

[Typedef]
id: has_subexemplar
is_a: has_exemplar ! has_exemplar

[Typedef]
id: subcluster_of
is_transitive: true