cleo-traveling-wave-rejection/Taskfile.yml at main · siplab-gt/cleo-traveling-wave-rejection · GitHub

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version: "3"

vars:
  delay_ms: 3

tasks:
  run_sims:
    desc: "Run all simulations"
    deps:
      - task: run_sim
        vars: { opto: "--opto", delay_ms: 0, outdir: "opto_on_delay0ms" }
      - task: run_sim
        vars:
          {
            opto: "--opto",
            delay_ms: "{{ .delay_ms }}",
            outdir: "opto_on_delay{{ .delay_ms }}ms",
          }
      - task: run_sim
        vars: { delay_ms: 0, outdir: "opto_off" }

  run_sim:
    internal: true
    label: "run sim {{.outdir}}"
    cmds:
      - python scripts/run_sim.py {{.opto}} --delay_ms {{.delay_ms}} > results/{{.outdir}}/run.log 2>&1
    sources:
      - scripts/run_sim.py
      - src/cleo_pe1/config.py
      - src/cleo_pe1/model.py
    generates:
      - "results/{{ .outdir }}/data.npz"

  plot_results:
    cmds:
      - python scripts/plot_results.py
        --opto_on results/opto_on_delay0ms
        --opto_off results/opto_off
        --delay results/opto_on_delay{{.delay_ms}}ms
    desc: "Combine results into a plot"
    deps:
      - run_sims
    sources:
      - scripts/plot_results.py
      - results/opto_on_delay0ms/data.npz
      - results/opto_off/data.npz
      - results/opto_on_delay{{.delay_ms}}ms/data.npz
    generates:
      - results/spiking_comparison.svg

  clean_sim:
    internal: true

  clean:
    cmds:
      - rm -rf results/opto_off
      - rm -rf results/opto_on_delay0ms
      - rm -rf results/opto_on_delay{{.delay_ms}}ms
    desc: "Clean up all result files"

  movie:
    internal: true
    label: "make movie {{.outdir}}"
    cmds:
      - python scripts/make_movie.py results/{{.outdir}}
    sources:
      - scripts/make_movie.py
      - results/{{.outdir}}/data.npz
    generates:
      - results/{{.outdir}}/animation.mp4

  movies:
    desc: "Create movies of the simulations"
    cmds:
      - task: movie
        vars: { outdir: "opto_on_delay0ms" }
      - task: movie
        vars: { outdir: "opto_on_delay{{.delay_ms}}ms" }
      - task: movie
        vars: { outdir: "opto_off" }

  default:
    desc: "Run all simulations and plot results"
    deps:
      - plot_results